| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4896 |
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| Symbol | |
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| ID | 8361072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 6124996 |
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| End bp | 6125745 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644967046 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003124531 |
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| Protein GI | 256423878 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.312016 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGGT TACAGCATAA AGTGGCAGTG ATTACCGGCG GTAACAGCGG TATTGGTTTC
GCTACAGCAC AGTTATTCAT TGCAGAAGGC GCACAGGTGA TTATCACCGG TCGTAATAAG
GAATCCGTTG ACAAAGCGGT AGCAGAACTG GGTCAGTCAG CAAAAGGTAT CGTATCTGAT
ACTGGAAGTA TGAAAGATAT CAAACAGTTA CAGGCGCAGG TAGCGGCGAT CCATCCGGCG
ATCGATATCA TATTTCTGAA TGCGGGTGTA GCAAAATTCT CCCCTATTGA AAACGCGGAT
GAAGCTTTCT TTGATGAACA GTTCGACATC AACGTAAAGG GATCTTACTT CACTGTACAG
CAGTTGCTGC CTTTACTGAA AGAAGGATCC TCTATCGTGC TGAATACTTC TATCAATGCC
CATATCGGTA TGGCGAATGC CGCTATCTAT GCCGCAAGTA AAGCCGCACA GTTAACATTG
ATCAGAAATC TGTCCGCAGA ATTCCTGAGC AAAAAGATCC GGGTGAATGC CGTAAGTCCT
GGTCCGGTTA CGACACCGCT GTATGGCAAA CTGGGTCTGT CTGAAGAGCA ACTATCTGCT
ACTGCCAGCG GTATATTATC CAGCATACCT GTGGGCCGCT TTGGTACACC GGAAGAAATC
GCGAAAACAG TCCTCTTCCT GGCATCTGAT GATTCTACTT TCCTGCTGGG AGCTGAACTG
ATTGCAGACG GTGGCATGAG CACTTTATAA
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| Protein sequence | MNRLQHKVAV ITGGNSGIGF ATAQLFIAEG AQVIITGRNK ESVDKAVAEL GQSAKGIVSD
TGSMKDIKQL QAQVAAIHPA IDIIFLNAGV AKFSPIENAD EAFFDEQFDI NVKGSYFTVQ
QLLPLLKEGS SIVLNTSINA HIGMANAAIY AASKAAQLTL IRNLSAEFLS KKIRVNAVSP
GPVTTPLYGK LGLSEEQLSA TASGILSSIP VGRFGTPEEI AKTVLFLASD DSTFLLGAEL
IADGGMSTL
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