Gene Cpin_4881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4881 
Symbol 
ID8361057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6104033 
End bp6106120 
Gene Length2088 bp 
Protein Length695 aa 
Translation table11 
GC content45% 
IMG OID644967031 
Productsulfatase 
Protein accessionYP_003124516 
Protein GI256423863 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1368] Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.652285 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAATG TGTTTCGCAA CAGATTCTCA CTGATTGTAT TGATTGTACT GTTGATGCTT 
GTACTTTCCT TCCTGACACG TGTCGTCTTA CTGCTTAGTA CACCGGCTTC AGGCGTATCT
GCCATACAGT TTGTGAGTGC CTTGTTTATT GGCGGAATGT ATGACCTTTC GGTCGCTTCC
CTTATTGTCA TTCCTTTTGT ACTGCATCTC TGGTTACAGA ATGAGTTTAT TTACCGGCTA
AAAGTATTGC CTTTTGTTAC GGCGGGATTC CTCACGTTCA TGGGCATCTT GCTCTTCACG
CATCTCGTCC CGAAAGATTA CAACAAAGAC CTGTATCATA TCTTGTTGTA TTATCTGACG
GCACGTTTTG CCATTTACCT GTTTCTCTTT TTTATGCCGT ATCACTTTCG CTTACAATGG
CGCACAGGCT TCTTGTATAT CGTGACGGCA TTGACGGTAT TCCTGTTACT GATGAACGCT
GTGAGTGAGT GGTTCTTCTG GCGGGAGTTT TCTACCCGGT ATAATTTTAT AGCGGTAGAT
TATCTGGTGT ATACGACCGA GGTGTTAGGA AATATTTCTG AGTCATATCC TTTAGTGCCG
ATTGTCAGTA CACTTGTCGT GATCGCCATT GTGGTCGTTG TGGTTATGCG GCATCCGATA
AAGGAAAGTG TCAGCAGGGT ACATATGTCC TTTGCCAAAC GATCGCTTAT TGCTGGCGGT
TTGTTCTTAT TTGCTTTTAG CAGCTATAAT ATCGTTAACG GGAAATGGCG GCATTTCAGC
ACGAATGAAT ATGCTAATTC GCTGGCAGGC AATGGTATCT ACGAATTTGC GGTGGCCTTT
ACACAAAACG AGCTGGACTT TTATAAATTC TACAAGACGA TTCCCGATAC CACCGCATTT
AGTAAGGTGC GGCAACAGCT GACTACGCCC AATAGCCATT TTATTGGTAA AGATCTTTAT
AGCATAGAAA GGGATATTAC TTATCCGGGG CCTGAACGTA AGCTGAATGT GGTGATGATT
AGTGTAGAGA GTCTGAGTGC TGATTTTATG AAGGCATTCG GCAGTACGGA GAACATTACC
CCTTACCTGG ATTCGCTGTC TAAAAAGAGT CTGCTGTTTA CCCAGCTTTA TTCCTCCGGC
ACAAGAACAG TCCGCGGTCT GGAAGCCTTG TCATTGTCTA TTCCTCCATC ACCAGGACAA
AGCATCGTGA AGCGCCCTGA TAATGCACAC CTTTTCTCTA TGGGGAGCGT TTTGCGCGCA
CATGGATATA CTACGCAGTA TCTCTATGGT GGTTATAGTT ACTTCGATAA TATGAAGGAG
TTCTTTGGTA ATAATGGCTA TACCGTCATT GATCGCTCTT CAATACCGGC TGATAAGATA
CATTATGAGA ATATCTGGGG GGTAGCAGAT GAAGACCTGT TTACGCTGGC ACTGAATGTA
CTGGATAAGG ATAACAGCGC TGGAAAACCT TTCTTTACGC ATATTATGAC GGTGAGTAAC
CATCGTCCTT ATACTTATCC TGACGGAAGG ATAGACATCC CCGCTGCTAT GCAGGTAAGA
CAGGGAGCGG TAAAGTATAC TGATTATTCC ATCAATAAAT TCCTCCGGGA AGCGAGTCAT
AAACCCTGGT TTGACAGCAC CGTATTCGTG ATCGTAGCAG ATCATTGCGC AGGCAGTGCG
GGTAGCGTAG AACTGCCAGT TACAGGTTAT CATATTCCCA TGTTGATCTA TGCGCCTAAG
ATACTGCAGC CGCAGGAAGT AAATACCCTG ACGGCCCAGA TAGATGTCGC GCCGACTATT
CTTGGTTTAC TCCACTTAGA TTACCGCTCT AAATTCTTTG GGCAGGATGT ATTAAACACA
CCGTCAGACA AACAACGTGC ATTTATCAGC ACTTATCAGG GATTGGGGTA CCTGCGGGAT
GGAAAGCTCG TGGTGCAATC ACCCGTAAAG ACAGTACATG AATATATTCC CGACTTCCAT
AACGGCAATG CGGCGCCTGT ACAGGTAGAG CCTGACCTAT CCCGGGAGGC GATCGCCTAC
TATCAAAGTA TCAGCTGGTT GCTGAAGAAC AGGAAACAGT CCTTTTGA
 
Protein sequence
MKNVFRNRFS LIVLIVLLML VLSFLTRVVL LLSTPASGVS AIQFVSALFI GGMYDLSVAS 
LIVIPFVLHL WLQNEFIYRL KVLPFVTAGF LTFMGILLFT HLVPKDYNKD LYHILLYYLT
ARFAIYLFLF FMPYHFRLQW RTGFLYIVTA LTVFLLLMNA VSEWFFWREF STRYNFIAVD
YLVYTTEVLG NISESYPLVP IVSTLVVIAI VVVVVMRHPI KESVSRVHMS FAKRSLIAGG
LFLFAFSSYN IVNGKWRHFS TNEYANSLAG NGIYEFAVAF TQNELDFYKF YKTIPDTTAF
SKVRQQLTTP NSHFIGKDLY SIERDITYPG PERKLNVVMI SVESLSADFM KAFGSTENIT
PYLDSLSKKS LLFTQLYSSG TRTVRGLEAL SLSIPPSPGQ SIVKRPDNAH LFSMGSVLRA
HGYTTQYLYG GYSYFDNMKE FFGNNGYTVI DRSSIPADKI HYENIWGVAD EDLFTLALNV
LDKDNSAGKP FFTHIMTVSN HRPYTYPDGR IDIPAAMQVR QGAVKYTDYS INKFLREASH
KPWFDSTVFV IVADHCAGSA GSVELPVTGY HIPMLIYAPK ILQPQEVNTL TAQIDVAPTI
LGLLHLDYRS KFFGQDVLNT PSDKQRAFIS TYQGLGYLRD GKLVVQSPVK TVHEYIPDFH
NGNAAPVQVE PDLSREAIAY YQSISWLLKN RKQSF