Gene Cpin_4880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4880 
Symbol 
ID8361056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6103477 
End bp6103923 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content45% 
IMG OID644967030 
Productpyridoxamine 5'-phosphate oxidase-related FMN- binding 
Protein accessionYP_003124515 
Protein GI256423862 
COG category[R] General function prediction only 
COG ID[COG3467] Predicted flavin-nucleotide-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.746169 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAGGTA CACTCAATCA ACAGGAAATG GAGGAATTAC TGCTTCGTAA TGTAACCGGT 
AGAATTGGTT GCCGTGATGG TGATCAGATA TATATTGTGC CGGTGAGTTA CGCTTATAAT
GAGAAATATA TCATCGCGCA TTCAGGAGAA GGTTTGAAGA TAGATATGAT GCGGAAGAAC
CCGCAGGTGG GCTTTGAAGT AGACGAGATC AGCGATCAGC GTAACTGGAA AAGCGTGATC
TGTCAGGGAA GATTTGAAGA AATATTGGAT GAAAAAGAAA AATATTATGC CATGAAGTTT
CTGGTGAGTC GGCTGATGCA CACGCAGCTG AGTGAGACAG CACGACTACC GGATGCGATA
GGAGAAGGGC ATGCGGCTCC GCTGATAAGA CCTATCGTAT ATCGTATTCG TATGGAGACG
ATGACAGGAA GATGCGAATT TGCGTAA
 
Protein sequence
MLGTLNQQEM EELLLRNVTG RIGCRDGDQI YIVPVSYAYN EKYIIAHSGE GLKIDMMRKN 
PQVGFEVDEI SDQRNWKSVI CQGRFEEILD EKEKYYAMKF LVSRLMHTQL SETARLPDAI
GEGHAAPLIR PIVYRIRMET MTGRCEFA