| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4855 |
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| Symbol | |
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| ID | 8361031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6073569 |
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| End bp | 6075080 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644967005 |
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| Product | Ricin B lectin |
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| Protein accession | YP_003124490 |
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| Protein GI | 256423837 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0410154 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0144537 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAAGAA CATTAAGCGG ATTTGTACTA CTATTGCTTG CCTTTTTCTT GAGCGGTTGC
GCAAAGAAAG AGGATAATGA AGCAAAGTTA CATATGGACG CAGCAAAATT AGCGGCAGCG
CAGCCTGGGA GCGGGTATGG TAGTCTGCGG GATGAAAATA TCCAATACTT TGGCCGCTGG
GATTTCAGCG ACAGTACAAA GTTCAGTGCC TGGTGGGGCG GCGCCTATAT CCGGGTAAAC
TTCACCGGTA CGACGGTGAA GATCAAAACG GGTAACATCA GTGATTTTTA TGTGAGTATC
GATGGCGGTC CCTGGATCTC TTACAGGAAT ATCGGTGGGG TGATCGATCT CACGACTACC
CCCTTGCCTG ATGGCCAACA TACACTCAGT GTGGCGCAGG GGAGGGATTA TGATTACCTG
TTTGTATTCG AAGGACTGAT ACTCGATATA GACGCCGTAA CAAGCAAACC TGCGACTTCT
TCCTATCTCA TAGAATATAT CGGTGATTCT ATTACTGCGG GTTTCATGGA TGATCAGGCG
AATGTTTCTG ACTACGCCTG GATCTGTTCG GAAGCGCTCG GTACGGAGCA TACCCAGATT
GCTTATCCGG GTATTGCGCT AGTGAGTAGT CCGCGGCACG GTGTCGCGAT GGACAGGCAG
TATTTTAAAC TAAAAACGCC GAATTATCCA TCTGCTCCCA ACTGGGACTT CAGCCGGTAT
ACGCCGCAGG CAATTGTACT GAACCTGGGT ACGAATGACA GCGACTATGA GGATTCAGAC
AGTGTATTTC AGGCGGTATA TTTCCAGTTA TTACAGGATA TCCGTACGAA GTATCCGCAG
GCGGAAATAT TTGTACTGCG TACTTTTCTG GGCATCCGTG CACAACCTAC GGCCGCTGCT
GTAGCTGACC GTATTGCAGC TGGTGATAGA AAGGTACATT ATGTGAATAC GGATGGCTGG
ATTACCCAAT CCACTGCTGA CTACCTGCCG GATAACCTGC ATCCCAGTGA GTCTGGACAT
ATTAAGATCG CCGGATTACT GAAAGCGGTA TTGGCGCCTT ATGTCAATAA TACACCTGTG
CTGGCAGATG GTATTTATAG CATCGTGAAC AGGAACAGCG GACTTGTAAT GGATGCTGCC
GGACAGGGAA CTGTCAGTGG TACGGCGATA CAGCAATATA CGGATAATGG CGGCGTGAAT
CAGCGCTGGC AGTTGACATA CCTGGGCAAC AACCGTTATA AGATCATCGG TGTACAGAGT
GGAAAATCGC TGGATATAAA GGGGCAGTCT TTGCAGGACG GTGCAGAGTT GCAATTGTAT
GATTATAGCG GAGGTGAGAA CCAGCAATGG ACATTGTCGG CTGTTTCCGG TGACTATTTT
TATATCACGG GTGTACAGAG TGGCAAGGTG CTGGAAATTC CTGCGCAGTC TACGGCTCCC
GGCGTTGCTA TCGAACAGTA TGGTAACAAT GGCGGTGCGC ATCAGCAATG GGCATTTTTA
ATTAGGAATT AG
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| Protein sequence | MLRTLSGFVL LLLAFFLSGC AKKEDNEAKL HMDAAKLAAA QPGSGYGSLR DENIQYFGRW
DFSDSTKFSA WWGGAYIRVN FTGTTVKIKT GNISDFYVSI DGGPWISYRN IGGVIDLTTT
PLPDGQHTLS VAQGRDYDYL FVFEGLILDI DAVTSKPATS SYLIEYIGDS ITAGFMDDQA
NVSDYAWICS EALGTEHTQI AYPGIALVSS PRHGVAMDRQ YFKLKTPNYP SAPNWDFSRY
TPQAIVLNLG TNDSDYEDSD SVFQAVYFQL LQDIRTKYPQ AEIFVLRTFL GIRAQPTAAA
VADRIAAGDR KVHYVNTDGW ITQSTADYLP DNLHPSESGH IKIAGLLKAV LAPYVNNTPV
LADGIYSIVN RNSGLVMDAA GQGTVSGTAI QQYTDNGGVN QRWQLTYLGN NRYKIIGVQS
GKSLDIKGQS LQDGAELQLY DYSGGENQQW TLSAVSGDYF YITGVQSGKV LEIPAQSTAP
GVAIEQYGNN GGAHQQWAFL IRN
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