| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4848 |
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| Symbol | |
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| ID | 8361024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6059636 |
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| End bp | 6061207 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644966998 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003124483 |
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| Protein GI | 256423830 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.101496 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00561902 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAAGA GTATTTCCTA TAAACATATT ATGACGGCGC TTTTGACAGC GGCCCTGTTT
ACCAGCTCCT GTACAAAGGA TCTGGACAAG ACGAATCCCA GTTACGCTAC ACTGGATAAT
TACTTTAAGA ACAGCGCTGA GATGCAGAAA GGCACGAATG CCATTTACTC CGCTTTTCAT
GCGGGTAACC TGGTGGGCAG GGAATGGTTT TTTGTACACG ATCTCAGGAG TGATGATGTG
TCATCAGGTG GCGGACAGCT GGAAGTGCCC AGGGCACAGA TGCTGAACGG CGCTACTTCT
TCTGATAATG CGGTGATGGC GAGTGTGTGG AGAGGGCTGT ATACGGTAAT TCATCGTGCG
AATACGGTGA TAGGCAGTGC GCCGAATGTA ACAGACAATG ATGAGTTACG CGACCAGTGT
GTCGCTGAAG CCAAGTTCTT TCGTGCCTGG GCTTATTTCG AGCTGGTGAC CCTCTGGGGG
CCTGTACCGC TGTATACGGT GGTTGTCAGT GCGCCCGATC AGTTTCAGGC AAGAGCGGCG
ACGGACGCTG TATATACTCA GATCATCAAA GACCTGACAG AAGCTGCTGC TGATCTGAAA
CCCAGCTATG GCGCCGCGGA CCAGGGGAAG ATCACTTCCG GTGCTGCCAA TGCCATGCTT
GGCAGGGCGC AGTTACAGAA AGGCGATTAT GCGGCTGCAA AAGAAGCTTT GCTGAAAGTG
ACGGGTTCCG GTTTGTATCA CCTGGTGAAC AATTACATGG ATAATTTCCT GGAAGAAACG
GAGTTCAATG CAGAGTCAAT CTGGGAGGCC GTTTATTTCG ACAGGGGCGA TAATGGTTTT
GACTGGAATG GTACCGGTGA TGGAGCAGGG ACTGCGCAAT CTACTATCCG TAATCAGGAG
TATAGTCCGG TAGCCTGGAG AAATCTTATT CCTTCCAATA AATATCTCAA CGAATTTGAA
AATACGGCTA CCGGTGCTGC TAAGACCGAT CCGCGTTATG GCGGTTCTGT ATACCAGACC
GGGGATAAGT TCAATAACGA TGCAGATGTA CTGACAGACG CGATGCAGAA TGGGAATGCT
TCGTTGGTGA ATGGCGTTAC CAAAAAAGTA AGCTGGCGTA AGTTTATGAT AATCTATAAG
CAAAGTCTAT CGACAGCTTC TTATCACCCG GGGGGCAACA ACCAGCGTAT TATCCGCTAT
GCGGAAGTGC TGCTGATGCT GGCGGAATGT GAGAATGAAC TAGGTAATAC AGGCGCCGCT
GTGGGTTATC TGAATCAGAT CAGGGACAGG GTATCAGTCG CCATGCCGCA TTATCCCACC
GCACAGTTCC CGGTGTCTAA TAAGGAGCAG ATAACGAAAG CATTGATGCA TGAGAAAATG
GTAGAAATGG GAGGTGAAGA GATCCGCAAC CGGGATATTC TGAGATGGCG GAAGAAGGGG
TATTTCACGA CGGATCCGTT GTCTTACTTC AGGGCTAACA GGGATGAGCT GTTGCCCATC
CCGCAGCAGG AAATTGATAA CAACCCACAA TTGGGAGCCG GAGGCGTAGC CAAACAGAAC
CCGGGTTATT AA
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| Protein sequence | MKKSISYKHI MTALLTAALF TSSCTKDLDK TNPSYATLDN YFKNSAEMQK GTNAIYSAFH
AGNLVGREWF FVHDLRSDDV SSGGGQLEVP RAQMLNGATS SDNAVMASVW RGLYTVIHRA
NTVIGSAPNV TDNDELRDQC VAEAKFFRAW AYFELVTLWG PVPLYTVVVS APDQFQARAA
TDAVYTQIIK DLTEAAADLK PSYGAADQGK ITSGAANAML GRAQLQKGDY AAAKEALLKV
TGSGLYHLVN NYMDNFLEET EFNAESIWEA VYFDRGDNGF DWNGTGDGAG TAQSTIRNQE
YSPVAWRNLI PSNKYLNEFE NTATGAAKTD PRYGGSVYQT GDKFNNDADV LTDAMQNGNA
SLVNGVTKKV SWRKFMIIYK QSLSTASYHP GGNNQRIIRY AEVLLMLAEC ENELGNTGAA
VGYLNQIRDR VSVAMPHYPT AQFPVSNKEQ ITKALMHEKM VEMGGEEIRN RDILRWRKKG
YFTTDPLSYF RANRDELLPI PQQEIDNNPQ LGAGGVAKQN PGY
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