| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4846 |
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| Symbol | |
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| ID | 8361022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 6056613 |
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| End bp | 6057716 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644966996 |
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| Product | Xylan 1,4-beta-xylosidase |
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| Protein accession | YP_003124481 |
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| Protein GI | 256423828 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3507] Beta-xylosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0960373 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00474985 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGCGTTT TAAAATTTTC ACCTGTTTTT ATCCTCCCGG CTGCATTAGC CTTCGGCTGC
TATAGCTGCC AGCCAGCCGG TTCTTCAAAG TCCGGCGATA GTACACACAC CACTATCTCC
GCTGACAGCA CCGGAAAGGA ATACCTTTCA CAGCCCCTGG TCAGCCATAT CTACACCGCT
GATCCGTCCG CCCATGTGTT CAATGGCAGG ATCTATATCT ACCCTTCCCA TGACACCGCC
ACCGGTATCC CGGAAGATGA TCTGGGCAGC CATTTCGATA TGAAAGACTT TCATGTCCTG
TCCATGGACG CTGTCGGCGG TCCCGTAACA GATCATGGTG TAGCACTCAG TATCAAAGAC
ATTCCCTGGG CCGGCCGCCA ATTATGGGCG CCGGATGCGG CTTATGTAAA CGGAACTTAT
TATCTCTACT TCCCGGTAAA AGACAAAAAG GATGTTTTCC ATATCGGCGT AGCCACCAGC
ACCAAACCCG AAGGACCTTT TACTGCAGAA AAAGAACCGA TCCCCCGCAG CTACAGTATC
GACCCTTGTG TATTCAGAGA TGATGATGGT AAGTTTTATA TGTACTTCGG TGGCATCTGG
GGCGGACAAT TGCAACGCTG GAATAGTAAC CAGTACGATT CTGCCAAAGG CAACCGTACA
CCCGAAGAAC TGGCTATCCT GCCCAGAATG GCGATGCTGG ACAAAGACAT GAAACATTTC
GACGGCCCCG TCGATGAAGT AAAAATAGTG GACGAAAAAG GACAGCCTTT CCATGAAAAA
GACAACGATA AACGTTTCTT TGAAGCATCC TGGATGCATA AATACAAAGG GAAATATTAC
TTCTCCTACT CGACTGGTGA CACCCACAAT CTGTGTTATG CCATCGGTGA TAGTCCCCGG
GGACCGTTCA CCTATAAAGG TATTATCCTG AAACCTGTGG AAGGATGGAC GAGTCACCAT
TCCATCATTG AAAAAGATGG TAAATGGTAC CTGTTCTACC ATGACGTGCA GTTATCCGGC
AAAACCTACC TCCGTAATGT CAAGGTGACC GAACTACATT ATAACGAGGA TGGCAGTATT
CAAACCATCA ATCCATCCCT ATGA
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| Protein sequence | MRVLKFSPVF ILPAALAFGC YSCQPAGSSK SGDSTHTTIS ADSTGKEYLS QPLVSHIYTA
DPSAHVFNGR IYIYPSHDTA TGIPEDDLGS HFDMKDFHVL SMDAVGGPVT DHGVALSIKD
IPWAGRQLWA PDAAYVNGTY YLYFPVKDKK DVFHIGVATS TKPEGPFTAE KEPIPRSYSI
DPCVFRDDDG KFYMYFGGIW GGQLQRWNSN QYDSAKGNRT PEELAILPRM AMLDKDMKHF
DGPVDEVKIV DEKGQPFHEK DNDKRFFEAS WMHKYKGKYY FSYSTGDTHN LCYAIGDSPR
GPFTYKGIIL KPVEGWTSHH SIIEKDGKWY LFYHDVQLSG KTYLRNVKVT ELHYNEDGSI
QTINPSL
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