| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4828 |
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| Symbol | |
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| ID | 8361004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6033837 |
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| End bp | 6035504 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644966978 |
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| Product | Ricin B lectin |
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| Protein accession | YP_003124463 |
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| Protein GI | 256423810 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000000773759 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAAGA GTCCAGCATT GCTGGTAATG AGTCTGCTGA CATTCATGGC CTGCAAACAA
GGTTTGCTGA CGCCAGTTGA AAAACCACAG AACGCTGATA ATACAGTAGG TATCAGTCAG
GCGATTACCG CTGATTATAT TACTGTGAGC ATCAAAAATG TCAAGAGCAG CAAATTCCTG
GAAGTAGCAG GAAATCCTGT GCAAAACGCT AAATTTAAAG ACAACGCATT GCTGCAGCAA
TGGGAGACTT CCCTCTCGGG TACAGAAACA AACAGGTGGC AGAAATGGCA CCTGATTTAT
CAGACTACAG TTAATGGTAC GAGATATTAT CACATCCGTA ACCTGCACAG TGGTAAACTG
ATAGACGTTC CGTCTGCCAG CGGCACATCT GGTACGGTAT TGCAGCAATA TGCCGCTTTC
CCCCTGTTAG CTGATCAGCA ATTATGGAGC CTTACCGATA TTGGTGGCGG ACAATACCGC
ATCGTCAACA AAGGTAACAG CTTATCCTTG TCAGTAGCAG GTGGGTCTAC CAGTAATGGT
GCGCAGGTCA TACAGGAGAC AACTGCGAGT GATAATAAAC AGTACTGGAC GATCACTGAG
ATTACACCAG ATACCTATCG TGACGACCAG GTCGTACGTT TCTTTAACCG TAACAGTGCC
AGTCTGGGAT CCGCTGCCTT TGACCAGGGC AATACGATTC CGCTGACATG GGGTGCTAAC
AACGGAAAAG TACTATGGGT AACACAAGAC GCCTGGGATG GATCGCAGGT ACAGTCCAAC
GGTATGTTCA ACTGTGGTCA TTTCTTCAGT TATAATAACT CCATATTTAT ACAGCCGTCG
AAAACAGACT GGACTCCGAA CAACGCACCT AATATGACCA TTCCTAACAG TACTTCCGGT
AAACCCAAAC AGATCTGTAA TATACAGTCG GGTACTACCT GGAGCTGGCC TGGTCCGGGT
GTAGAGATCG GTGATAAAGT CTATATGCAG TGCGGTGAAG GGAATGGTCT GAATGCGACC
AATCAATCCC TGTACCGGCT GACGCAGAGC GCCACTACAC AATGGACTGC CGAACGTCTG
ATGCCGAATG GATTTAATAA TTATACCGCT ATCAGTTATT CTACCGGCCT GGTAAAACCA
GGCGATGGAT ATGTATATGC TTTCGGAAGC GAAGCGACGA GTTTCGGTTA TGGCAGTTAT
ATACATGTCG CCAGATTTGC TGAAAATAAT CCGCTGCAAT GGCAGTATTG GAGTGGATCG
GCATGGACTT CCAGTCCGGC CGCAGGCGCT GCTTCAAAGA TTGCGGACGC CAGAGGTAGT
AACAGTGTAG CCTATCTGAA TGGCAAATAT ATCCTCATGA CACTGGATCA GGGATTCAAT
TGCGATCCTG ACAGAAGCGT GTATATTGCT ACCTCTACTT CTCCTACAGG ACCATTTACC
GCACAGATCA AGGTATATAC TATCCTGGAG TACTTTAAGG AGCAATACAC CCGTTATTAT
ACGCCTGTGA TTCATCCGGA GTTTAACAAC GGCAGAAATG AGTTGTTGCT GACGTATAGT
GTCAACTTCT CTGCCTGCGG ACTGGATGGT TGCGAAGGTG CATGGCTGGA TCCGTATTAT
TACAGGCTGA AGGGGATCAG AGTGCCTTAT TCGAAGATAG GGCTGTAG
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| Protein sequence | MKKSPALLVM SLLTFMACKQ GLLTPVEKPQ NADNTVGISQ AITADYITVS IKNVKSSKFL
EVAGNPVQNA KFKDNALLQQ WETSLSGTET NRWQKWHLIY QTTVNGTRYY HIRNLHSGKL
IDVPSASGTS GTVLQQYAAF PLLADQQLWS LTDIGGGQYR IVNKGNSLSL SVAGGSTSNG
AQVIQETTAS DNKQYWTITE ITPDTYRDDQ VVRFFNRNSA SLGSAAFDQG NTIPLTWGAN
NGKVLWVTQD AWDGSQVQSN GMFNCGHFFS YNNSIFIQPS KTDWTPNNAP NMTIPNSTSG
KPKQICNIQS GTTWSWPGPG VEIGDKVYMQ CGEGNGLNAT NQSLYRLTQS ATTQWTAERL
MPNGFNNYTA ISYSTGLVKP GDGYVYAFGS EATSFGYGSY IHVARFAENN PLQWQYWSGS
AWTSSPAAGA ASKIADARGS NSVAYLNGKY ILMTLDQGFN CDPDRSVYIA TSTSPTGPFT
AQIKVYTILE YFKEQYTRYY TPVIHPEFNN GRNELLLTYS VNFSACGLDG CEGAWLDPYY
YRLKGIRVPY SKIGL
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