| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4825 |
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| Symbol | |
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| ID | 8361001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6029589 |
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| End bp | 6030575 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644966975 |
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| Product | anti-FecI sigma factor, FecR |
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| Protein accession | YP_003124460 |
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| Protein GI | 256423807 |
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| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.04929 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000000730448 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACATAA GCAACACCAG GTTAAAAGAA TTATTAGATA AATATCTCGA TGGTACGGCC
TCTGCGGAGG AGATCAGTGA GGTAGATGCA TGGTATGCGT CTTTCGCGTC GCATAAGGGC
GTCACGGAAC AATTAAACGC AGATCGGCAG GTGGCGCTGG AGCAACTGCT CTTTTCCCGT
ATTCATCGGG AAATCAGTCA GGCACAGGCG CCGTTACGGG TGCTCCGGTC GCGTGCGCGT
TACTGGTGGG CAGCCGCCAG CGTGGCGGTG CTGCTGGCAG CAGGCGGTGT ATATTATGCC
GTTAACCGCA TGGCCGAGCA GGGAGTTGCC GGTACGATGA TCACGGAAAC GGTGGAGAAG
GGCAATATCA GGAAGATCAC ATTGCCGGAC AGCAGTATCA TCTGGCTGAA TGCGGATAGT
AAAATCCGCT ATGCGCAGCA GCATGGCCGT GAGATATGGC TGGAAGGGGA AGGGTACTTT
GAAATCGCGC CCCGGCAGGA AGAGGGTTTC CTGGTACATA CCGGCCAACT CGATGTACAG
GTACTGGGTA CCAGTTTTAA TATTGACGCT TATGCGCCGG CAGATTCGAT CACTGTAACC
GTCAGTAGCG GTAAGGTGGC GGTCAGGACG GAGAAAAATA CAGACGTTGC CATTGCTGCC
AATCAACAGG CCGTTTACAA GGCGACGGCT GACAGCATAA ACAGATACGA TATCAGTGCG
GCTGATTTTG GCGCCTGGAG GGAGGGGCTG CTGGTCTTTA AAAATGCCAG TTTTGAAAGT
ATTGCCCGTA CGCTGGAACG CCGTTATAAG GCGCATATCC GCTTCGACGG ACAAAAAACA
GCTTCCGCCC TGCTTTCTGC CAGATTCGGC AAGGATGAGC CTATAAAGGA CATTCTACGC
ATGTTATGCG ATATATATGG TTTCAACTAC CGGAAGGAAC CAGGTAGTGA GGAATACCTG
GTGTATGATG CGCAGCCACA TCATTGA
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| Protein sequence | MDISNTRLKE LLDKYLDGTA SAEEISEVDA WYASFASHKG VTEQLNADRQ VALEQLLFSR
IHREISQAQA PLRVLRSRAR YWWAAASVAV LLAAGGVYYA VNRMAEQGVA GTMITETVEK
GNIRKITLPD SSIIWLNADS KIRYAQQHGR EIWLEGEGYF EIAPRQEEGF LVHTGQLDVQ
VLGTSFNIDA YAPADSITVT VSSGKVAVRT EKNTDVAIAA NQQAVYKATA DSINRYDISA
ADFGAWREGL LVFKNASFES IARTLERRYK AHIRFDGQKT ASALLSARFG KDEPIKDILR
MLCDIYGFNY RKEPGSEEYL VYDAQPHH
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