| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4824 |
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| Symbol | |
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| ID | 8361000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6026218 |
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| End bp | 6029559 |
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| Gene Length | 3342 bp |
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| Protein Length | 1113 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644966974 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003124459 |
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| Protein GI | 256423806 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00024385 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000000773033 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGAAGTT ATGAAAAGAG AATTGCGGAG TGTCTGCATT TGCGCGCCAT TAAAATGGCC
TGCCTGTTAT TCCTATGCGC TTTAGTGATG ATTGGAAATG TTTTTGCACA AACAGGTACA
GAAAGAGATC TGAGACGTAC AATGGTTGAC ATACAGGTCG TCAATCAGTC CTTCGATAAA
GTATTTGAAC AGATCGAAGC CGCTACCGCA TTCCGGTTTG TATTCAATCC GTCGGAAATC
GCCCGGAGCG GTAAGGTCAC CATCAGCAAA AAAAATATTT CAGTTGAGCA GGTGCTCAGA
CTGCTGCCTC CGCCTTTACA ATATGAGCTG AGGGGTAGTA ATATATTGAT CCTTGAGGAA
AGGAAGCCTG TGAACAGCGC AGCTCCACGG CTGTTACACA CAGGTCGTGT ATCGGATGCG
GAAGGACATG TATTGCCTGG CGTCAGTATT ATCGTAAAAC GTACTGCACG CAGGGTGATC
ACGGACGAAG AAGGCGTGTT CCGTATTGAA GCCGGTCCGG GAGACACTTT ACGTTTCTCC
CTGCTGGGGT TCCAGGATCA GGAAACCGCC GTTTCACTGT CAGCTCCTCA GGACATTGTC
TTACAGCCTG GTTCCTCTGC GCTCCGGGAA GTCGTGGTGA TCGGTTATGG TTCTGCCAAT
AAAGAGAACC TGACCACGGC CATCGGCACC GTAAAGGGTG AGCAGCTGAA TGAAAGGGCG
ACGACTTTAA ATGTCATGCA GGGACTGGCT GGTAAGGTGG CAGGTGTCAG TGTGATGATC
AATTCGGGGA AACCGGGTGG TAATCCGATC GTGAAGATCA GGGGAACCGG TTCTATCAAT
GCGTATAACG GTCCGCTATA TGTGGTTGAT GGCATTGTAG GCGCTGACCC TATGAACATC
GATCCAAACA TTGTTGAGTC AGTGGATGTG CTCAAAGATG CGGCAGCTTC GGCGATCTAT
GGGGCCAGGG GTTCAAACGG GGTGATTGCG ATCACCACAA AGAAGGGCGG TAAAAACACA
CCGGCCATCT CTTTCCGTAA TACCCTCAGT TTTGCTACAC TGGCCAGGGA GATAGACCTG
ATGGATGCAA ATGAAGCCCT GGAAATGTTC AGGCGTGAAT ACGCATATCA GCCTGGCCGT
ATCGCACCGC ATCTTGATCC TGACAGACAG TTTTCCCGGA AGGAAGATCT GTTCAATGCA
GATGGTACGC CTAAGTATAA TACGGATTGG CAGAAAGAAG CCAGTCGCCT GGCGGTATCA
CATGAACATG CGTTGTCGTT TTCATTAGGT AAAGAAGATA TTTCTGCACT GGCAGGACTT
TCATTTAGCG ATCAACAGGG AATTCTGATC AACAGTTATT CCCGTCAGGT GAATGGGTTT
ATCAATCTCG GCTGGAACGT AAAGAAATGG CTGCACATTC AGACGGTGCT TAACAGCGGT
GCATTCAAGC AGAATAACGT CGATATTAAT ACGTTTGGCC TGAATGCCGT GCGCCAGATC
TATGAATTTC TGCCTTTTTT CCCGGTGAGA TACCCGGATG GCACTTATTC CCGGAAAGCA
GATTATCCGG GGGCAGAGAG CTCTGAAAAC CCGGTGAGAC TGATGAATGA GGTACAATCC
GTAGCAGGAC GTACCTATAC CATGGGCAAT CTGCTGGCGA CCTTTTACCT GAGTCCTAAG
CTGCAATTTA CCGCAGGTAT CAGCGGACAA ACAGGCGCCA GCTATAATTT ATATTTCTCC
GGCAGGGATA TCATCGGTTA TTCCGATGTA CAACAGGGGG TGGCTACACG GGGGCATGGT
CAGACAGGCT CCTGGACTTC GGAAGATTAT TTTACCTGGA AGGATAATTT CGGGAAACAT
CATCTGACAG GCGTGGCCGG CGCCAGCTGG TATTACTTTG CCAGTATGAA TACACAGGCA
GGCAGCGAAG GCTTCTTTGA TGATTTCTTC TCGTATAATA GTCTGCAGAC AGGTCTGGTG
CCACAGCGGC CAAGCTCCGG ATCAAGCCGG AATGCGATGA ATTCGTTTTA CATGCGGTTC
AACTATGACT ACGATAACCG CTACCTGTTC GGGATATCCC TGCGGGCGGA TGGATCCTCG
CGTTTTGGCG CCAATAACCG CTATGGTTAC TTCCCCAGTT TTTCGGCCGC CTGGCGTTTA
TCGTCAGAGC CTTTCCTGCG GGATGTGCGT AGCATTAACA GTCTGAAACT CCGTGTCAGC
TATGGTATTG TGGGTAATTC TGATATCGGC GATTATGTGA CACAGAGCAG AATTAATAGT
GGGCAAACGC CTTTTGGCGG ACAGGTAGAA CCTTCTGCCA CACTCGGCGG ATTGGGTAAC
CGGGATCTCA AATGGGAGAG GGCGCATCAG CTGAATCTTG GTGTGGATGC TACCTTGCTG
GATAGAAGGG TACAGTTCAC CGCCGATGTC TATAACAGGA TCACCAAAGA CCTGCTGTAT
TTTAAGCTGT TGCCATCTAC TTCCGGATAT GAAGGAGTAT TTGATAATAT AGGATCGATC
CGTAACAGGG GACTTGAATT GTCATTGACC ACGGAGAACA TCCGCAGAAA GAATTTCTCC
TGGAATACTT CACTGATCTA TTCCATGAAC CGTTCGCTGG TGCTAAACCT GAACGGAGAT
ATCATGTATC CGTGGGCAGG ACGTATCATG GAGGGAAGGC CCTTAAATGA ATTCTACGGT
TATCAGCGAC TGGGCACCTG GGGTACAAAT GAAGCTGCGG AAGCGGCTGT ATACGGGAAG
AAACCGGGCG ATCTCAAATA TGCAGATCTG AATCATAATA AGGTGAAAGA CGCGGGCGAC
CGTACCGTAT TGGGGAATGG AATGCCTGAT TTCGAAGGTA GTATTGTGAA TACAGTCAAC
TACCGGAATT TCTCCCTGGC TCTCGATCTG CAGGTGATAT ACGGGCATAG TCTGGCGAAC
CTGACACGAT TGATCATGGA AAACGCGGCG CCTGTCACGA ATAGTTACAG TAGTCTGCTG
GATGCCTGGA CACCGGAACA TCAGGGCACA ATGAATGCTG CCTTGCGTTT ACCAGGTGAT
GGTTTTGACA GTGAGATCGA CAGTTATAAT ATCGAGAAAG GATCGTTCCT GCGGGTGCGT
AATATCACCT TGGGTTATCG TTTGCCATCG GTATGGCTGA AACGCTGTCA TCTGAGATCG
GCGGTACTGG GTGTGAGTGC GGAGAATTAT TTTCTCTTCA CGAAATACAA AGGATATGAT
CCGGAGGCGT CTTCTTTTGA CGGAGACTTT AACCAGGGCG TTGATCTGTA CCAGTATCCG
AAGGCAAAGA CGATGGCGTT CACACTAAAT GTTACATTTT GA
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| Protein sequence | MGSYEKRIAE CLHLRAIKMA CLLFLCALVM IGNVFAQTGT ERDLRRTMVD IQVVNQSFDK
VFEQIEAATA FRFVFNPSEI ARSGKVTISK KNISVEQVLR LLPPPLQYEL RGSNILILEE
RKPVNSAAPR LLHTGRVSDA EGHVLPGVSI IVKRTARRVI TDEEGVFRIE AGPGDTLRFS
LLGFQDQETA VSLSAPQDIV LQPGSSALRE VVVIGYGSAN KENLTTAIGT VKGEQLNERA
TTLNVMQGLA GKVAGVSVMI NSGKPGGNPI VKIRGTGSIN AYNGPLYVVD GIVGADPMNI
DPNIVESVDV LKDAAASAIY GARGSNGVIA ITTKKGGKNT PAISFRNTLS FATLAREIDL
MDANEALEMF RREYAYQPGR IAPHLDPDRQ FSRKEDLFNA DGTPKYNTDW QKEASRLAVS
HEHALSFSLG KEDISALAGL SFSDQQGILI NSYSRQVNGF INLGWNVKKW LHIQTVLNSG
AFKQNNVDIN TFGLNAVRQI YEFLPFFPVR YPDGTYSRKA DYPGAESSEN PVRLMNEVQS
VAGRTYTMGN LLATFYLSPK LQFTAGISGQ TGASYNLYFS GRDIIGYSDV QQGVATRGHG
QTGSWTSEDY FTWKDNFGKH HLTGVAGASW YYFASMNTQA GSEGFFDDFF SYNSLQTGLV
PQRPSSGSSR NAMNSFYMRF NYDYDNRYLF GISLRADGSS RFGANNRYGY FPSFSAAWRL
SSEPFLRDVR SINSLKLRVS YGIVGNSDIG DYVTQSRINS GQTPFGGQVE PSATLGGLGN
RDLKWERAHQ LNLGVDATLL DRRVQFTADV YNRITKDLLY FKLLPSTSGY EGVFDNIGSI
RNRGLELSLT TENIRRKNFS WNTSLIYSMN RSLVLNLNGD IMYPWAGRIM EGRPLNEFYG
YQRLGTWGTN EAAEAAVYGK KPGDLKYADL NHNKVKDAGD RTVLGNGMPD FEGSIVNTVN
YRNFSLALDL QVIYGHSLAN LTRLIMENAA PVTNSYSSLL DAWTPEHQGT MNAALRLPGD
GFDSEIDSYN IEKGSFLRVR NITLGYRLPS VWLKRCHLRS AVLGVSAENY FLFTKYKGYD
PEASSFDGDF NQGVDLYQYP KAKTMAFTLN VTF
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