| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4819 |
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| Symbol | |
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| ID | 8360995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6015230 |
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| End bp | 6018331 |
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| Gene Length | 3102 bp |
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| Protein Length | 1033 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644966969 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003124454 |
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| Protein GI | 256423801 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0660191 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000000000000144143 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGTATTCCA CAGTTTCCTC CTATGGCCCT TTTATGCGCT ATAAAAAGCG TGGGCCTGTT
GCCGGCTTTT CTTTTGTTCA ACTATTCCAT CTATGTTTCT TTTTAGTCCT GCTGCTGGTG
GGTGTGCAGG CATCTGCTAC TAAGCCGTAT GCAGATACGC TTATCACTGG TCGCGTAAGC
GGCGAAGGGA ATGAACCTTT ACCAGGTGCT AACGTAACCT TACGCAGTGC ACCTTCAAAA
GGTGTGACGA CCCGTCCTGA CGGTACATAC AGTATACAGG CTTCACCACA GGATGTACTG
GTTGTTACTT TTGTAGGATA TGCCCGTCAG GAGATCCTTA TTAATGGCAG ACAACGCGTA
GATATTGTGT TACAGGCCCA GGCGACCAGT CTTGAAAAAG TAGTGGTAGT AGGTTATGGT
ACGCAGAAAA GAGGAGAGGT GACGGGCGCT ATTTCCTCTG TTGATGCCGG TGATATCAAA
GACTTGCCGG CTGCGAGTCT GCAACAATCC TTACAAGGTA AATCCGCCGG TGTACAGATT
ACCCAGAACT CCGGTTCACC GGGTAAAAAT GCGCAGGTAC GCGTCAGGGG ATTAACCTCC
ATCAACAACT CTGATGTACT GTATGTCGTA GACGGTGTAC CGCTCACCGC CAACGGGATC
AATGCGATCG ATCCTTCGAA TATTGCTTCT GTTCAGATAT TGAAAGACGC TTCTTCGCAG
GCTATCTATG GTTCAAGAGG TGCGAATGGT GTGGTGCTGA TCGAAACCAA GAAGGGGAGT
AAGAATTCAT CTCATATTTA CTTTAATGCT TACGGCGGTG TACAGCAACT CAGGAAGAAA
TTGAAGATGC TGGATACCAG GGATTTTATT ACGTTGAATA CCGAAGCATA TAAGAATGCG
GGACAGGCTT CTCCATGGGG CGATCCTTCT CAGTATCCAT TGAACACCGA CTGGCAGGAT
GCGATGTTCC GTACGGGACC TATACAGAGT TATGACCTGG CATTTGCCGG TGGCAGCGAA
AAACTTACTT ACCGCCTGAG TGGTAACTAT TTTAACCAGG ACGGTATTAT CATTGGGTCT
TCTTTCAAAC GTGCTTCTTT ATCGCTTAAT TCAACGTTTA AGGCAAATGA GAAGGTGGAA
GTAGGAGAAA ATATCTCTAT TGCGAAAAGT ACGCAGTACC TGGTGGGAGA AGGCGCTACC
AGCAGGGTGG ATCTGTTGTC AGCACTCAGT ATGGATCCTA CGGTGCCTTT GCTGGATTCA
GCCGGTAACT ATGTGCCTGC CCGGTATTCA GATATCCAGC ATCCGATTGC CAGCATCAAC
AATATCTCCC AAAATCATCC ATACAATAAC TGGTCTGTTG TAGGCGCTAC TTATCTGCAG
ATCAAACCGT TGAAAGGACT GGCGTTGAGA TCCAACCTGA GTATTGATCT GAATTTTTCA
GATGATAAAG CTTTTGCGCC TTCTTATTAT GTGTCTGCAG CGCAGAATAA TCCTGTGCCT
AATCTTTCGC AGACAAAAGC CGTCGGCTAT AGCTGGACAT GGGATAACAC CGCTACCTAT
GAACAGAAGT TCGGAGATGA TCATGAAATA AAATTACTGG CGGGTGTTTC TCAGCAGCGG
TTCAGCTATG ATTTTATCAG GGGGAGTAAC CAGGGGCAAC CCAGTAATGA TCCATATCTG
CAATACCTGG ATGCCGGTAC TGCCAATCCT GCTGTAGCCG GTAGTATGGT GCGCTGGAGC
CTGCTTTCTT ATATCGGTCG CGTAAACTAT AATTTCAGAG AGAAGTACTT CTTAACTGCC
ACCCTGAGAA GAGATGGTTC TTCGAAGTTT GGCGCTAATA ACAAGTATGG TAATTTCCCC
TCTGCTTCAG TCGGTTGGTC GCTGACCAAA GAGGGTTGGT TTGACAATGT AAAGGCACTT
CATTCATTGA TGTTAAGGGC CAGCTGGGGT GTGGTGGGGA ATCAGTCCAG CGCCGGTTAT
TATGACTTCT CTTCCACCAT TAACAACTAT TATTATGCCT ATGGCAATCC GGCTAATGCG
GCTTTGACTG CTGAACCTAA TGGACTGGGT AATCCTGATC TGAAATGGGA GCAGGTACGC
CAATGGGATA TCGGTTTTGA TGTCAGGTTG TGGGAAGGCT TGAGTGGTAC AGTGGATTAT
TATAACAAAA AGACAAAGGA TATGCTGCTG AGGATCCCTA TTTTATACGA AAGCGGATTC
TCTACCGGTC CACTGACCAA TGTGGCTTCT ATGTTCAATG CAGGGTTTGA GTTTCAACTG
GACTATAATC ACACCTTTGG CAATGGCGTA AGTCTGAATG CCGGTGTGAA TCTCTCCACA
TTGAAAAATA AAGTTTTGAG TCTGCAGAAT GAGGGTGCAC AGATCTTCAG TAGTCCGAAT
ATGACACGTG CCGGACAACG GGTAGCTGAA TTCTACGGTT ATGTATTTGA CGGTATTTTC
CAGAACCAGC AGGAGATTGC CAACCATGCG ACACAGCCGA ATGCAGCGCC TGGCGATATC
CGTTTTAAAG ACCTGAATAA TGATAAAGTG ATCAACGATC TGGATCAGAC TTACCTGGGA
TCTCCTATCC CGAAAATCCA GTATGGTTTT AGTGTGGGTA CAGGGTATAA AGGCTTTGAC
CTGAACCTGT CCTTTTTCGG CGTAGCCGGG AATAAGATTT ATCAATCCTA TAAATACAAC
ACAAACGGCT TCTTTATTTC GAACTATAAT ATGGAGCAGG AGATACTGGG CCGGTGGCAT
GGTGAAGGGA CGAGTAATAC CATTCCCCGC CTGAATGCAA ATGATCCGAA CTACAATGCG
CGTGCTTCCA GTTATTATCT CAGTAGTGGT TCTTACCTGC GTCTGCGGAA CGTGACCCTG
GGGTATAATT TCCCGGATAA ACTGATGGAG AGATGGAAGA TGAGCGGACT GCGGGTATTC
GTCTCGGGAC AAAACCTGCT GACGTTTACA AAGTATGACG GTTATGACCC GGAAATCGGG
ATCACATTCG GGGGGAATGC CGGTACGCTG AACCTAGGTC AGGATCAGGT GAACTATCCG
CAGCCAAGAA TAATTACTGC CGGTTTGAAC CTTACTTTAT AA
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| Protein sequence | MYSTVSSYGP FMRYKKRGPV AGFSFVQLFH LCFFLVLLLV GVQASATKPY ADTLITGRVS
GEGNEPLPGA NVTLRSAPSK GVTTRPDGTY SIQASPQDVL VVTFVGYARQ EILINGRQRV
DIVLQAQATS LEKVVVVGYG TQKRGEVTGA ISSVDAGDIK DLPAASLQQS LQGKSAGVQI
TQNSGSPGKN AQVRVRGLTS INNSDVLYVV DGVPLTANGI NAIDPSNIAS VQILKDASSQ
AIYGSRGANG VVLIETKKGS KNSSHIYFNA YGGVQQLRKK LKMLDTRDFI TLNTEAYKNA
GQASPWGDPS QYPLNTDWQD AMFRTGPIQS YDLAFAGGSE KLTYRLSGNY FNQDGIIIGS
SFKRASLSLN STFKANEKVE VGENISIAKS TQYLVGEGAT SRVDLLSALS MDPTVPLLDS
AGNYVPARYS DIQHPIASIN NISQNHPYNN WSVVGATYLQ IKPLKGLALR SNLSIDLNFS
DDKAFAPSYY VSAAQNNPVP NLSQTKAVGY SWTWDNTATY EQKFGDDHEI KLLAGVSQQR
FSYDFIRGSN QGQPSNDPYL QYLDAGTANP AVAGSMVRWS LLSYIGRVNY NFREKYFLTA
TLRRDGSSKF GANNKYGNFP SASVGWSLTK EGWFDNVKAL HSLMLRASWG VVGNQSSAGY
YDFSSTINNY YYAYGNPANA ALTAEPNGLG NPDLKWEQVR QWDIGFDVRL WEGLSGTVDY
YNKKTKDMLL RIPILYESGF STGPLTNVAS MFNAGFEFQL DYNHTFGNGV SLNAGVNLST
LKNKVLSLQN EGAQIFSSPN MTRAGQRVAE FYGYVFDGIF QNQQEIANHA TQPNAAPGDI
RFKDLNNDKV INDLDQTYLG SPIPKIQYGF SVGTGYKGFD LNLSFFGVAG NKIYQSYKYN
TNGFFISNYN MEQEILGRWH GEGTSNTIPR LNANDPNYNA RASSYYLSSG SYLRLRNVTL
GYNFPDKLME RWKMSGLRVF VSGQNLLTFT KYDGYDPEIG ITFGGNAGTL NLGQDQVNYP
QPRIITAGLN LTL
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