| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4818 |
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| Symbol | |
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| ID | 8360994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6013660 |
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| End bp | 6015120 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644966968 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003124453 |
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| Protein GI | 256423800 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0677815 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000000348036 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAAATATA TTAGTTTTCT TTTAGTCATT ACTGTTATAT GCAGTTCCTG TTCGAAGTTC
CTGGAAGAGG ATCCTACAGC GCATTTATCC ACCACTACAT ATTATAAAAC AGCTGCTGAT
GCAGAAGCTG CTGTTAATGC CGTTTATGCC GCTGCCAGGC CACAGAATTT CTTTGCATTG
GAAACCCGTA TTGCGGTAGG CGATATTATG TCGGATGATG CGGAGAAAGG TGGCGGTGGT
GCTTCCGATG TGGCGGAGAT GCAGCAGCTG AAGTTATTTG TCGCCAAACC GGATAATGGT
TATGTAGAAG GCGCCTGGCA GGCGAATTTC CATGGCATCT ACCTGGCTAA TCTTGTATTG
GACAGGGTGC CACCTATTGC GATGAATGAG ACGGATAAGC AAAGGATCCT CGGGCAGGCC
CGTTTTTTCC GTGCTTATTT TTATTTGCAG CTGATGGAGT TATTCGGGAA TGTACCCCTG
ATTACGAAAC CATTGCAGAC GGGCGATTAT AATCAACCGC AGGCGACACC CGCGCAGGTA
TGGGCGCAGA TCGAGCTGGA TGCGGATAGT GCGATAGCGG TATTGCCACA GCAAAGCGAA
CTGACCGTTG ATAAACAAGG AAAAGCGACT GTTGGCGCAG CGAAGGCATT GTTACTCTAT
GCATATTTAT GGCAGCAGAA ATGGGCGGAT GCGCAGCGTA TAGGGGATGA AATCATCAAT
TCCGGTCAGT ATACCCTGGC AGCAGATTAT ACAAAGATTT TTACATCGGC AGGCGAGTTC
AATACCGGTT CCATCTTTGA GATCAATATG GCGAATGTGC CGGGGAAAAA CGTGGGTAGT
AATATCAACC TCTGGCAGAA TCCCCGGAAT ACCTGGGGCT ATGGATTTGT TTGTCCGACG
CAAAACCTGG TGAACAGCTT CGAAACAGGC GATCCGAGGC TAAAAGCGAC CGTTATAGCC
AATGGCGACG TTCTTCCGGA TGGTTCGGTG GCCAATACGA CTTCCAGCCA GACAGGGTAC
TATAACAAGA AATACTGGCT GCCTCAGAAC GAGATTCCTT ACAATAACGG GGGAGGCGCA
GGGGATGGTC CGACCAATGA GCGTATTTAC CGCCTGGCCG TGGTCATGTT ATGGACGGCT
GAAGCGGCAG TGCATAATGG CGATGCTGGG CATGCGACTG ACCTGGTCAA CAAAGTGAGG
GAAAGGGCGC GCAAAAGCGG CGGGAATACC GATATGGGTA TATTACCCCC TTATGGGACC
GTGACGCTGG ACAATATTTA CCATGAACAG CGGGTAGAAA CGGCCCTTGG CGATCATATC
CGCTTTTTTG AGCTGGTGCG GACCGGCAAG GCGGCAGGCA CATTACCCGG TTATAAAGAA
GGAGTACACA ATCACCTGCC TATCCCTTTG AGGGAGATCC AGTTAAGTAA CGGACTGCTA
CGGCAGAACC AGGGATATTA G
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| Protein sequence | MKYISFLLVI TVICSSCSKF LEEDPTAHLS TTTYYKTAAD AEAAVNAVYA AARPQNFFAL
ETRIAVGDIM SDDAEKGGGG ASDVAEMQQL KLFVAKPDNG YVEGAWQANF HGIYLANLVL
DRVPPIAMNE TDKQRILGQA RFFRAYFYLQ LMELFGNVPL ITKPLQTGDY NQPQATPAQV
WAQIELDADS AIAVLPQQSE LTVDKQGKAT VGAAKALLLY AYLWQQKWAD AQRIGDEIIN
SGQYTLAADY TKIFTSAGEF NTGSIFEINM ANVPGKNVGS NINLWQNPRN TWGYGFVCPT
QNLVNSFETG DPRLKATVIA NGDVLPDGSV ANTTSSQTGY YNKKYWLPQN EIPYNNGGGA
GDGPTNERIY RLAVVMLWTA EAAVHNGDAG HATDLVNKVR ERARKSGGNT DMGILPPYGT
VTLDNIYHEQ RVETALGDHI RFFELVRTGK AAGTLPGYKE GVHNHLPIPL REIQLSNGLL
RQNQGY
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