| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4817 |
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| Symbol | |
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| ID | 8360993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6011813 |
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| End bp | 6013507 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644966967 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003124452 |
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| Protein GI | 256423799 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0936776 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000000465252 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGTTCGCAG CTTCCCTGGG CCTGTGCATG GGAATTCTTA CACTGGTATC CTGCAGTGAC
AAGAACTTCC TTGATCAGAC GGAGACAAGC AACCTGGACG AGAAATCGGT CTTTTCCGAC
AGTGCCAGGA CAGTACAATT CCTTACCAAC ATTTACATTG ACATCGGTTT TACCGAGAAT
GCCACCCGTT TCGGGAACGG TGGACTGGAC GCTGCCTGTG ATGAGGCGGA GCCGCAGAAA
TCGGCTTCTA TCACCACTTC TGTCCAGTTT GCCACGGGAA CCGTCAATCC TTCTATTATC
AGCGGGGACG CCTGGAGTTT GTGTTATACG AACATCCGGC GGGTCAACCT CCTGCTGAAA
CATCTTCCCG GTACGCCTAT TCCTTCCTAT ATCCGTAATG TAATGGGGGC AGAGGCCCGT
TTTCTGCGGG CGTGGTATTA TGCCATCCTC CTGAAGCATT ACGGGGGTAT ACCGCTCACC
GGCGATTCCG TGTACAATGT TACAGACCAG ATCCCGGCCA CCCGTCACAC GTTTAAAGAA
TGTGTGGACT ATATCGTCTC CGAATGTGAT GCTGCCGCTG GCGCATTGCC ATTGGAGCGG
GTAAGAGAGG ATTATGGCCG CGCCAGTGGT GGCGCTGCAA TGGCCCTGAA AGCCAGGGTA
TTGCTGTATG CTGCCAGTCC GCTGTTCAAT GGCGGGAACG TAGATCCTCA GAATGCGCTG
ACCGGTTATA CAGACAATGT GCCCGAAAGA TGGAAACTGG CCGCAGACGC CGCTGGCCTT
GTAATAAATT CGAATGCCTA TTCCTTGTAT GAGGACAATG CTACGGCGCC GGGTTATGGC
TTTTATAAAG TATTTACCCT GCGTGTCAAT TCAGAGTATA TTCTGGCGAA AATGCAGGGC
TTGAACCGTG AACTGGAGAC TGCCTGGCAG CCACCTTCCC GGGGCGGCGG ACAGGGAGGA
TTTCCTTACC AGGAATTCGT AGACGCTTTC GGTATGGCCA ATGGTAAACC GATCACGGAT
CCAACTTCAG GGTATGCCGC AACGGATCCT TATAAGGACA GGGACCCAAG GCTTGCTTAT
TCGGTGATTC GTGACCAGAC GCCATTGATA CAGAATAACG GTCTGAAAGA ACCGGTTAAT
ATCTACCTCA CCACAGCTGG CAGTGGCGTG AGCCAGGACG CCGTACTGGC GGGAACGCCT
ACCGGGTACT ATACAAAGAA GATGCTGGAT GAAAATATCA GTGCCAATTT TATTCATGGC
AGCCAGCGTT GTTTCCCATT GATCAGGTAT GCAGAAGTAC TGCTGAATTT TGCAGAAGCG
AGTAATGAAT TTGATGGACC GACACAAGCG GTGTACGATG CGATACAACT GGTGCGGAGA
AGAGCGGGAC TGATGCCTTA TGAATTGCCT GCCGGACTCT CAAAGGATCA GATGCGGGAG
GCAATACAGG CCGAAAGGAG GGTGGAACTG GCATTTGAAG GACATCGTTT CTGGGATGTA
AGAAGGTGGA AGATCGCCGA GACGACACAG AACAAGGCGA TGACCGGTAT GAAAGTAATA
CGCAATGGCA ACAATGCCAC CTATACCGCC TTTTCCGTAC GTAAACATAA TTTCCGCAAG
GCTATGTACC TGTGGGCAAT TCCACAAAGT GAAACCGCCA AGTCTCCCGA ACTGGCGCAA
AATCCAAACT GGTAA
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| Protein sequence | MFAASLGLCM GILTLVSCSD KNFLDQTETS NLDEKSVFSD SARTVQFLTN IYIDIGFTEN
ATRFGNGGLD AACDEAEPQK SASITTSVQF ATGTVNPSII SGDAWSLCYT NIRRVNLLLK
HLPGTPIPSY IRNVMGAEAR FLRAWYYAIL LKHYGGIPLT GDSVYNVTDQ IPATRHTFKE
CVDYIVSECD AAAGALPLER VREDYGRASG GAAMALKARV LLYAASPLFN GGNVDPQNAL
TGYTDNVPER WKLAADAAGL VINSNAYSLY EDNATAPGYG FYKVFTLRVN SEYILAKMQG
LNRELETAWQ PPSRGGGQGG FPYQEFVDAF GMANGKPITD PTSGYAATDP YKDRDPRLAY
SVIRDQTPLI QNNGLKEPVN IYLTTAGSGV SQDAVLAGTP TGYYTKKMLD ENISANFIHG
SQRCFPLIRY AEVLLNFAEA SNEFDGPTQA VYDAIQLVRR RAGLMPYELP AGLSKDQMRE
AIQAERRVEL AFEGHRFWDV RRWKIAETTQ NKAMTGMKVI RNGNNATYTA FSVRKHNFRK
AMYLWAIPQS ETAKSPELAQ NPNW
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