| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4814 |
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| Symbol | |
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| ID | 8360990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6007288 |
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| End bp | 6010365 |
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| Gene Length | 3078 bp |
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| Protein Length | 1025 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644966964 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003124449 |
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| Protein GI | 256423796 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0976743 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000000000000101535 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGGCACTCA ATTATATTCA ACGATATATC TCTGCACTTA GCTGTCTGCT ATGCCTGCTT
TGCGGCAGCG TATACGGGCA GGAGTCTGCT GGTATTAGCG GCAGACTGGT AGATGCTTAT
GGTCAGCCGC TGGCAAAAGC ACTTGTTTAC GTTAAGGGAA CAGGCGACAC CACATTGACT
GATGCAGCAG GTAAATTTAC ATTAGCAGCC GGGCGTAACA GCGTTCTCGT AATGCGATAT
CCCGGCTATA AACAGCTGCA ACATGTTGTG AAAGAAAATA CTGTCGTGTT GCGTATGGAG
GAAGTTTTTA TTCCTAACCC GGAGCACATC CCTGTATTAT ACGGAGAAGC GGATCGTCGC
AGCAGTGTGG GCGCTATAGG CACGGTATAT ACCAGCCAGT TGTCAGCTAC ACCGGCTACT
TTATATGCCT ATGCATTACC TGGACGTCTT GCAGGATTGT ATACCCAGCA AACAAGCGGT
TTCCGTAATC CGGGTACCGG GAATAACTTT GATGTGGATC AGTTTGTAGG AAACATCCCG
AGATCGGGTG CACTGGAAGC GAATGACAAC TCGGAGATCA ATCTGTGGTT GCGCGGACAA
ACGCCTGTCA CCATCGTAGA TGGTGTACAA CGGGATGTAT ATTCTATAGA TCCGGAGAAT
ATTGAATCTA TCTCGGTACT GAAAGATGGA CTGTCTACTA TTTTATTGGG ACAGCGTAGT
TCGCGGGGCG TATTACTGGT GACCACCAAA CGTGCCCGTG CCGGTAAACC GCGTCTGTCA
TTTACCGCAC AGACAGCGAT ACAGCAGTCT TTAAGTATGC CGAAGGCATT ACCCGCCTGG
CAGTATGCAT ACCTGTTAAA TGAAGCTTTG CAGAATGACG GCAAAGCGCC TTTATACAAG
GAAGCAGACA TCCGTGCATT CCGTGATCAT TCAGATCCTT ATGGTCACCC TGATGTGAAC
TGGTATGACC AGGTATTGAG AGATAATGCG CCTTTGTCAA GATATAATCT GAACATCAAC
GGCGGTGGCG ATGTGGCCCG TTATTCCGTA TCACTGAACT ATACCGGTCA ACAGGGTATC
TTCAAATCAT CACCAGAGAA TAGTTATACG ACGAATGCCG GTCTGAAAAG ATACCTGATC
AACACAGACG TCAATATCGA CGTCACCAGT AACCTGAATG TCGGTATGCA GTTATTCGGC
CGTTTACAGG AAGGTACACA ACCAGGAGCG GGTACCGGTA AAATACTGAA TGATCTGCTT
TCTACTTCCA ATGCAGCCTA TCCTATCACC AATATCAACG GCAGCTGGGG TGGTACAGGT
AACCTGACCA CCAATCTGCT GTCATCTACG GTCAACAGTG GTTATATCCA GGACAATAGC
AAAGACGTGA TGGCGAATGT GGACCTCCGT TATGACCTGG GTGACTGGCT GCCTGGTTTG
TCGCTGAAAG GCAAGGGCAA CCTGTCGATC CAGTCCGCGA ATGCAATCAA CCGTAGTAAG
CAGGATCTTG TCTATAAAAT GAACATCACA CAGGGCGATA CTACTTATGC CAGGTTTGGA
CAGGCGGTGA CCCAGCACAA TGACTTTATC TCTGTTTTCA ATGCACAGTA TTTCTTCGGA
CAGGTCTCTC TCAATTATGA TCGTCAGTTT GGTGCGCATG GACTGAGTGC CATTGTACTG
GCGGACAGAA GACAGACGAT CTTCAACTAT GACCTTCCCG GTAAAGCCAC GAACCTCTCA
GCGAAGGCTA CCTACAACTA TGGCAACCGA TACTTTGCGG AGGCTGCCAT CAACAGAAGC
GGTTATAACC GTTATATGCC CGGCAGACAA TACGGTACTT TCTATGCAGG CGGCATCGGC
TGGGATATTG CCAGGGAAGC TTTTATGCAG GACCAGGCAG GTTGGCTGAA TCAGTTGAAG
CTGCGGGCCA CCTATGCGCA GACAGGCAAT GGAATTGATA ATTCGGGCTA CTATATCTGG
CGTCAGGATT TCAGTGAGAA CAATGGTATA GGCGGTGGTA TTTATGAACA AGGTACTGCC
CGTTCACCAG GATCAGGTTT CCAGGAAAAC GGATTGGCGA ATACAAACAT TTCATGGGAG
ACAGCCCGTA AGATAGACGT AGGTGTTGAC ATCTCCCTGT TCAATAACCG TTTGCAGGTA
ACGGTAGATT ATTACCAGGA CCGTTACGCG AATCTTTTAC AGATAAGAGG TAAGAGTATT
GTTTTATCCG GAGCTGCCTA TCCACCGGAG AACATCGGCA TCAATCTTTA CAAAGGAGGA
GAGCTGACGG TGACCTGGCA GGCTGATATC AACGACTTTC ATTATTTCAT CACTGCGAAT
GGCAGCATGG AGCAGAGCAG GGTGATTTTC ATGGATGAAC AACGCCGCGA TTATGAATGG
AATAAACGAA CAGGACAGCC GGTAGGTATG CGTTTCGGAT ATATTGCAGA TGGCTTTTTG
CAGACAGCCG AAGAAGCTGC CGCTGCGCCT GTCATTACCG GTTACCAGCC ATTACCCGGC
GATATCAAAT ATAAAGACCT GAATGAAGAC GGTGCGATCA ATCAGTTTGA TGAAGCGCCT
ATTGGTAAAT CCAGTCCACG TATTTACTAT GGCATCAGCG CCGGTATTTC CTGGAAGGGA
CTGGAATTAA GTGCCTTGTT GCAGGGCGTT AGTAACCGCA CGAACTACGT AGCCAATTTT
GCTACAGAGT TAGGGTTCCA GTTCCTCAAC TTCACTTACG GACAGGCTTA CGAACAGATC
ACTGGCCGCT GGACACCTGA AACAGCCGGT ACTGCCACCT ATCCTCGTTT GTCGGCAGAT
GCAAACTACA ATTACAATAA AGCCAGTTCT ACTTTCTGGG TGCGTAACGG CAATTACTTC
CGTCTGAAGA ATGTGAGCAT TGCCTATAAC CTGCCTTATG TATGGGTGCA GCGACTGAAA
CTGGGCGGGG TGAAAATCTT TGCCAATGGG TTAAACCTGT TCACACATGC GCCTTATGAT
TTTGTAGATC CAGAGGTAGG AGTAGGCGCC TATCCGATTC AACGGGTATT GAATACAGGT
CTGAATATTA AGTTCTAG
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| Protein sequence | MALNYIQRYI SALSCLLCLL CGSVYGQESA GISGRLVDAY GQPLAKALVY VKGTGDTTLT
DAAGKFTLAA GRNSVLVMRY PGYKQLQHVV KENTVVLRME EVFIPNPEHI PVLYGEADRR
SSVGAIGTVY TSQLSATPAT LYAYALPGRL AGLYTQQTSG FRNPGTGNNF DVDQFVGNIP
RSGALEANDN SEINLWLRGQ TPVTIVDGVQ RDVYSIDPEN IESISVLKDG LSTILLGQRS
SRGVLLVTTK RARAGKPRLS FTAQTAIQQS LSMPKALPAW QYAYLLNEAL QNDGKAPLYK
EADIRAFRDH SDPYGHPDVN WYDQVLRDNA PLSRYNLNIN GGGDVARYSV SLNYTGQQGI
FKSSPENSYT TNAGLKRYLI NTDVNIDVTS NLNVGMQLFG RLQEGTQPGA GTGKILNDLL
STSNAAYPIT NINGSWGGTG NLTTNLLSST VNSGYIQDNS KDVMANVDLR YDLGDWLPGL
SLKGKGNLSI QSANAINRSK QDLVYKMNIT QGDTTYARFG QAVTQHNDFI SVFNAQYFFG
QVSLNYDRQF GAHGLSAIVL ADRRQTIFNY DLPGKATNLS AKATYNYGNR YFAEAAINRS
GYNRYMPGRQ YGTFYAGGIG WDIAREAFMQ DQAGWLNQLK LRATYAQTGN GIDNSGYYIW
RQDFSENNGI GGGIYEQGTA RSPGSGFQEN GLANTNISWE TARKIDVGVD ISLFNNRLQV
TVDYYQDRYA NLLQIRGKSI VLSGAAYPPE NIGINLYKGG ELTVTWQADI NDFHYFITAN
GSMEQSRVIF MDEQRRDYEW NKRTGQPVGM RFGYIADGFL QTAEEAAAAP VITGYQPLPG
DIKYKDLNED GAINQFDEAP IGKSSPRIYY GISAGISWKG LELSALLQGV SNRTNYVANF
ATELGFQFLN FTYGQAYEQI TGRWTPETAG TATYPRLSAD ANYNYNKASS TFWVRNGNYF
RLKNVSIAYN LPYVWVQRLK LGGVKIFANG LNLFTHAPYD FVDPEVGVGA YPIQRVLNTG
LNIKF
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