| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4797 |
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| Symbol | |
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| ID | 8360973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5984803 |
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| End bp | 5985474 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644966947 |
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| Product | ThiJ/PfpI domain protein |
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| Protein accession | YP_003124432 |
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| Protein GI | 256423779 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0693] Putative intracellular protease/amidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.13301 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0019745 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTCAAAGA AAATATTATT TATCGTATCT AATGCCAGTT TTATTGGTCC TAATAACAGA
CAGACAGGCG TATTCCTGGA TGAAGTGGCG CACCCTTATG TAGAATTTGA CGATGCACAT
TACCAGATAG ATTTTGCCAG CATCACCGGT GGAGTTCCTG CTGTTGATAA TCTTACCGCC
AGCGAAGAAA GCTCCAATGC GCGGTTCATC AAGGACGGCG GACTGGCAAA AATGCAACAC
AACCGTAAAC TGTCGGATGT AGACACCAGT GGGTATGATG CAGTATTCGT ACCAGGTGGT
TTAGCGCCAA TGGTAGATAT GCCGGAAGAT CCGCTGTTAA AGAAAGTAAT TGCGGGTTTC
TATGATAGCG GTAAAATTGT AGGCGCCGTG TGTCATGGTC CCGTATCACT CCTGAATGTG
AGACTGAACG ATGGTAGTTA TCTGATTGCG GGAAAGAATA TTACTTCTTT TACGAATGAA
GAAGAAGATA ATTATGCGAA GAATGATGTG CCTTTTGAAC TGGAAACAGC ACTAACTAAC
CAGGGCGCTA AGTTCCATGC AGCAGCGCCA TGGTCTTCGA ATAGTATTGC AGATGGCAGA
TTGGTAACAG GACAGAATCC TGCTTCAGCG AAGGGTGTGG CACAAAAGAT GATTGCATTG
CTGGGGGCAT AG
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| Protein sequence | MSKKILFIVS NASFIGPNNR QTGVFLDEVA HPYVEFDDAH YQIDFASITG GVPAVDNLTA
SEESSNARFI KDGGLAKMQH NRKLSDVDTS GYDAVFVPGG LAPMVDMPED PLLKKVIAGF
YDSGKIVGAV CHGPVSLLNV RLNDGSYLIA GKNITSFTNE EEDNYAKNDV PFELETALTN
QGAKFHAAAP WSSNSIADGR LVTGQNPASA KGVAQKMIAL LGA
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