| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4790 |
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| Symbol | |
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| ID | 8360966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5969977 |
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| End bp | 5971638 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644966940 |
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| Product | hypothetical protein |
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| Protein accession | YP_003124425 |
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| Protein GI | 256423772 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000821118 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.489267 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTAT ATATTAGGAG CTTAATACTG ATTACGGTGT TGGCGGCTGT CGGTTTTAAT
AAAACCAATG CGCAGGGCAA TGTCAGTTCC TGCACCTGCG AAGGTCTGAA ACCTTTTTTC
GATTACCTGA TCGCTTCCCA GCGACTGTTC ATTCAGCCGG AAGACGGTAT CCTGGTATCC
TCTATACTGG AGGACGCCAG GAACGCCGGG TACACGATAT CCTACACACA GTGCCAGGTG
TTGTCCCGTA ATGTGAATGG CCAGTTCTTC GCGAAAATCA AGAGTGTTGC CAGTGCCACC
AAATACCAGG CGGTCATCGG TAACTGTACG GTGTCATTGA ATTCAGTGAA TGCAAGTGCC
TTTACGTTCA ACAATCTGCA GAGTAATGCT TGTGGAACGA CGGGCATAGT GTCTTACCGT
ACGAAAGCCA ATAGCACCTT AGTGGCCAAT CTCCAGGTAG ATTCCTGCCT TAACTGTCGT
GCAGAAGATG TTGATGCCGT TTATTCCTGT TATAGTCCGG TTACGGAGCA TTCTGTTAAC
CCTTATCTAT ACGGATTGTC GGGCAACTGG CGACCTTACC GTTCCTATGC CTATTACGGA
GACCGTAAGG AAAAGAATCC GAAAGAGGAT CTGTCATTAA AAACAGCGGG TACTATTGAA
GGATATAAGA GCTACTGGAA ATTTGAAAAC GGTCAACTGA CAGGTATGGC AGAGAACTCG
AAAGATACTG CTATTTGGGT CTGGAATAGT GAACTGACCC TCGTAAACCG GAAGGGACTG
GAATTGGAGA ATCACGACCC CTTAGGACGG TATAATGCCG GGTTGTACGG ATATGATGAT
GCGCTGCCCG TGGCAGCGGC GCAGAATGCC CGCTACAGAG AAATTGCCTT TGAAGGATTT
GAGGACTATG GTTTTAAGAT AACACCTTGT GATGGACCGT GTCTGGTACC TAAAAGTTTT
GATTTCTCTT CTTACAAAAG CAAGTTGGAT ACTACGCAGC AACATACCGG CTTGTTTAGT
CTTCGGGTAG ATACCGGTAC GAATGCAGGT ATTATAGCGC CTGTTGCTGG TACGGCAGAA
GATGGCTTCG GACTGACCTT TAATAAAGCA CACGTATCCT GTGCACAAAC TGTTCCCGGA
TTATCATCGA TAAAAACAAC GTCGGCTGCA TTGTTACCCG CTTTTTCTCC GATAGCCGGA
AAAACTATTG TGATCAGTGC CTGGGTAAAG GAACTGGTTG AATGCAAAGG AGGTGCTTAC
ACAGGTAATC AGTTCGCAAT AGTGGTGAAA CAGTTAAATG ACAGTACAAC AGTTATAGCC
CAACCACAAG GGGCAATCAT TGAAGGATGG CAGCGTTATG AGGAGGTGAT CTCTGTACCC
GGTGATGCGG TATCTGTTGC GATAGTCATG AAAGCCACCG GAGGACATGC CGCTTATTTT
GATGATATCA GGATACATCC CTATAACGCC AATATGAAAT CATATGTGTA CAATCCTTAT
GACCTGCGTC TTATGGCGGA GCTTGATGAG AATAATTATG CCACCTTCTA CGAATATGAT
GATGACGGTA CGCTTATCCG CCTGAAGAAA GAGACAGAAC GTGGTATTAA AACGATCACA
GAAACAAGAA GTGCACTTCT AAAAGAAAAT TCTGATCAAT GA
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| Protein sequence | MKLYIRSLIL ITVLAAVGFN KTNAQGNVSS CTCEGLKPFF DYLIASQRLF IQPEDGILVS
SILEDARNAG YTISYTQCQV LSRNVNGQFF AKIKSVASAT KYQAVIGNCT VSLNSVNASA
FTFNNLQSNA CGTTGIVSYR TKANSTLVAN LQVDSCLNCR AEDVDAVYSC YSPVTEHSVN
PYLYGLSGNW RPYRSYAYYG DRKEKNPKED LSLKTAGTIE GYKSYWKFEN GQLTGMAENS
KDTAIWVWNS ELTLVNRKGL ELENHDPLGR YNAGLYGYDD ALPVAAAQNA RYREIAFEGF
EDYGFKITPC DGPCLVPKSF DFSSYKSKLD TTQQHTGLFS LRVDTGTNAG IIAPVAGTAE
DGFGLTFNKA HVSCAQTVPG LSSIKTTSAA LLPAFSPIAG KTIVISAWVK ELVECKGGAY
TGNQFAIVVK QLNDSTTVIA QPQGAIIEGW QRYEEVISVP GDAVSVAIVM KATGGHAAYF
DDIRIHPYNA NMKSYVYNPY DLRLMAELDE NNYATFYEYD DDGTLIRLKK ETERGIKTIT
ETRSALLKEN SDQ
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