Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4770 |
Symbol | |
ID | 8360946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 5946839 |
End bp | 5947405 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644966921 |
Product | hypothetical protein |
Protein accession | YP_003124406 |
Protein GI | 256423753 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0355911 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.556668 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAATCG TCAAGGATAA CATTTTCACG ACCGGTGTAT CCGGTACTAT CGGAAAGAAA ATGACACTGA GTATTCGTAA AGGAAAAACA ATCGTAGGCG TCAAACGCGG ACCAAACAGC TTACCGCCGA CAGAAGAACA ACTGGCCGTA CAAAACAGGT TCACTGATGC TGCAACGTTC GCAAAGAACG CCATACAGGA CCCTGTATTG AAAGCAGCTT ATCAGAAAGC GGCGAAAGGC GGACAGTCTG CGTTTAACGC TGCATTCAGA GATGCTGCAT TACCACCGGT GATAAGGCTG ATCGATACCA GCGCATACAA AGGACAAACA GGCGATAGTA TCACTATCAA CGCACACGAT GTGTTACCAC CGGTAGGCGT GAAAGTGACT ATTTTATCAC AGGCCGGCGT CGAACTGGAA AGCGGTGACG CATTACCGGA TGACCATAAA CGTTACTGGA AGTATTCCGT AACAGCAGCC AATGCTGCAT TGACAGGTAC CGTCATTCGT GTAGAAGCAA CCGATGTTCC GGGCAATAAA GGCTCCCAGG AGATTACCAT CTCCTAA
|
Protein sequence | MAIVKDNIFT TGVSGTIGKK MTLSIRKGKT IVGVKRGPNS LPPTEEQLAV QNRFTDAATF AKNAIQDPVL KAAYQKAAKG GQSAFNAAFR DAALPPVIRL IDTSAYKGQT GDSITINAHD VLPPVGVKVT ILSQAGVELE SGDALPDDHK RYWKYSVTAA NAALTGTVIR VEATDVPGNK GSQEITIS
|
| |