Gene Cpin_4770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4770 
Symbol 
ID8360946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5946839 
End bp5947405 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content48% 
IMG OID644966921 
Producthypothetical protein 
Protein accessionYP_003124406 
Protein GI256423753 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0355911 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.556668 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATCG TCAAGGATAA CATTTTCACG ACCGGTGTAT CCGGTACTAT CGGAAAGAAA 
ATGACACTGA GTATTCGTAA AGGAAAAACA ATCGTAGGCG TCAAACGCGG ACCAAACAGC
TTACCGCCGA CAGAAGAACA ACTGGCCGTA CAAAACAGGT TCACTGATGC TGCAACGTTC
GCAAAGAACG CCATACAGGA CCCTGTATTG AAAGCAGCTT ATCAGAAAGC GGCGAAAGGC
GGACAGTCTG CGTTTAACGC TGCATTCAGA GATGCTGCAT TACCACCGGT GATAAGGCTG
ATCGATACCA GCGCATACAA AGGACAAACA GGCGATAGTA TCACTATCAA CGCACACGAT
GTGTTACCAC CGGTAGGCGT GAAAGTGACT ATTTTATCAC AGGCCGGCGT CGAACTGGAA
AGCGGTGACG CATTACCGGA TGACCATAAA CGTTACTGGA AGTATTCCGT AACAGCAGCC
AATGCTGCAT TGACAGGTAC CGTCATTCGT GTAGAAGCAA CCGATGTTCC GGGCAATAAA
GGCTCCCAGG AGATTACCAT CTCCTAA
 
Protein sequence
MAIVKDNIFT TGVSGTIGKK MTLSIRKGKT IVGVKRGPNS LPPTEEQLAV QNRFTDAATF 
AKNAIQDPVL KAAYQKAAKG GQSAFNAAFR DAALPPVIRL IDTSAYKGQT GDSITINAHD
VLPPVGVKVT ILSQAGVELE SGDALPDDHK RYWKYSVTAA NAALTGTVIR VEATDVPGNK
GSQEITIS