| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4765 |
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| Symbol | |
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| ID | 8360941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5942057 |
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| End bp | 5942902 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644966916 |
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| Product | polysaccharide export periplasmic protein |
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| Protein accession | YP_003124401 |
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| Protein GI | 256423748 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00350662 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.271358 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACTCA GTAATTGCGA AATCAATTTC AGTAATCCCT TTTTTCTGTT ACTCTCGTTT
GTATCAGCTA TCCCCCTGTT TACGTTCATG TCTTGCTCAA CGCCAAAAAA TGTTACCTAT
TTCAGAGATA TTCCTGATAC GGTGCTGAGA AGATCCATTG ACCAGGCGCC TTATTATACG
CCTGAAATAC AGGTAGATGA TATCCTGCAG GTGACTATAC AAACCCTCGA TCCGGCGTCA
ACCGCAATGC TGAATCAGAC AAATACTGCC TCCTGGCCTG TTACCGGAAC CAGCGGAACG
CAACCAGCTA GTAATACAGC AGCTTCCAAT GTGAGCGGTT TCCTGGTTGA TAAAGACGGC
TACGTCGTAC TGCCCCTTAT CGGTAAAGTA CTCGTGAAAG GAAAAACCAC TGATAAAGTA
AGAGACGATA TCCGCGCAAA AGCCGCAGAA TACTATAAAG ATCCTGTTGT GAATGTTCGG
TTTGCAAATT TTAAGATCAC CGTACTGGGA GAGGTAACAC GCCCCTCCAC GTACATCGTA
CCCAATGAGA AAGTCACCCT GCTCGATGCC ATCGGTATGG CAGGCGACCT GACCATTTAC
GGTAAAAGAG AAAATGTCAT GCTGATCAGA GATGCGGGTC CCAAAAAGGA ATTTATCCGC
TTCAACCTGA ACGACAGCAA AACATTTACT TCCCCCTATT TCTATCTGCG GCAGGGAGAT
GTTGTATACG TTGAGCCAGA TAAGAACAAA GTGTCAGGGA CAGATACGAA TTCGGTAAAA
AGAATCGCCG TTATCACATC CGTACTGACG CTGCTGGTAG TTGTGATTTC AAGGATCAAT
TTCTAA
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| Protein sequence | MRLSNCEINF SNPFFLLLSF VSAIPLFTFM SCSTPKNVTY FRDIPDTVLR RSIDQAPYYT
PEIQVDDILQ VTIQTLDPAS TAMLNQTNTA SWPVTGTSGT QPASNTAASN VSGFLVDKDG
YVVLPLIGKV LVKGKTTDKV RDDIRAKAAE YYKDPVVNVR FANFKITVLG EVTRPSTYIV
PNEKVTLLDA IGMAGDLTIY GKRENVMLIR DAGPKKEFIR FNLNDSKTFT SPYFYLRQGD
VVYVEPDKNK VSGTDTNSVK RIAVITSVLT LLVVVISRIN F
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