Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4764 |
Symbol | |
ID | 8360940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 5939642 |
End bp | 5942038 |
Gene Length | 2397 bp |
Protein Length | 798 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644966915 |
Product | capsular exopolysaccharide family |
Protein accession | YP_003124400 |
Protein GI | 256423747 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0489] ATPases involved in chromosome partitioning |
TIGRFAM ID | [TIGR01007] capsular exopolysaccharide family |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000328255 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.519364 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAAACG ATATTCATAA AAACGGAGCC TCCAGAAATA ACCACGCATC GTCAGCTGAT TTCGAGAACG AAGAAGAAGG TCTCGACCTC AGAAAGATAG TCGATAAGAT GATCAGATAC TGGTACCTCT TCGTGATCTG TATCATAGCA GGCATCGCAT GCGCTGTACT TTATATGCGC TACGCCACGC CAAGCTATAA GATCAGCGCC AAAGTACTGG TACAGGATGA TAAGAAAAAT GGAAATGTAC CCGGCGCCGA AATCCTGGAA CAGCTGGAAA TGTTTTCCAG TAAAAGCAAT GTGGACAATG AAGTTGAAAT ACTCAAGTCC CGTTCGCTCA TGGAAAAAGT AGTACGCGAC CTCGACCTGA ACGTCAGCTA CTTCGTAGAA GGCCGCGTCA AGAAAACAGA ACAGTTCATC CGCCTGCCGT TTAAATTCAA ATGGCTGTAC CTGAAAGATA CCCTGGAGCA ATCGAGCTAC GTAGTCAAAA TGCTCGACAA CAATAAACTC AGCCTCAGCA CCAAAGGTAT TCACAGGGAA GCGGCCTGGA ACGACACCTT TCACCTGCCG GAAGGTATCG TGAAACTGGA ACGTAACGAA TTCTATCCCA TTCTTAATAA AGAATACCAG ATCAGGGTCA CCTCCTTTGA TTATGCAGTA GGCCGTTACC AGAAACTCCT GGACATCAGT ATTCCAAATA AACAGGCTAG TACCATCAAC CTGGTACTGA CCAATACCAT CCCGGAGAAA GGAGAACTGA TACTTAATAA ACTGCTCCAG ACTTACCTCA GCGCCAGCGT AGAGGATAAG AACAGGATTG TAGACAGCAC GATCTCCTTT ATTGATAACA GACTCGGGAT CGTTACCCGC GAACTGACCA GCGTAGAAAA GGATATCGAA CAGTTTAAAC AATCCAATCA GCTGGCCAAC CTGGAAGAAC AATCCAAATT GCTGGTTTCC AATACAGGCG ATTATATGAA ACAGCTCACC GAACAGCAGG TGAGAATGAA TGTAGTAGAG TCGCTGGAAC AATATATGCG GGATGAACAG AACGCCAGAA GGGTCGTACC ATCCTCCCTC ATCGTACAGG ATCCTACCTT CCTGGGTATT GTAGAGAAAT ACAACGCACT GCTCCTGGAA AGGGAAAGAC TGCTGATGTC CAGTACAGAG TCTAACCCAG TTGTGAAGAA TATGGATCTG CAACTGAGTG GTCTGCGGGC AGACCTCCGG AATAACCTCG CCTCCCTCAA ACAGGGTATA CAGGTGAGTA TCGATGAATT GGAACGCAAT AATGGCCATA TCAGCCAGAA GATCCGGGAG GTGCCTGGTA AAGAACGCAT CTTCCTCGAT TATTCCCGTC AGCAGGCAGT GAAACAGGAG CTCTACCTGT TTCTGCTTAA AAAGCGGGAA GAATCTGCGA TCTCCAAGTC TTCCAATATA GCAGTCGCAA GAGTAATAGA CGCCGGTAAA AGCGATCCTG TGCCCTTTAA ACCGAAAGGT TCCGTTATTT ATATTATCGG CTTCATCGCC GGTCTGGTGT TCCCGACGCT GTGGATCTAC CTGCAGGGCC TTCTGGGACG CCGTATCAGC AACAAACAGG ATATCCTCAA TAATACCCCG GTGCCTATTC TTGCGGAAAT CGGGCATAAC AAAGACAAAG ATATCATCGT GGTGGGCCGC GAATCCAGAA CGCCGATCGC CGAGCAGTTC AGGGCTATCC GTACCAACCT GCAGTTTATA CTCTCCAATG AGGGGGATAA GGTGGTCATG CTGACCTCCA GCATGAGCGG TGAGGGTAAA TCATTCGTCG CCACCAACCT GGCAGCCGTA CTGTCCTTAT CGGGCAAGAA AGTGCTGCTC ATGGAAATGG ACCTCCGCAA ACCCAAGATC TCACAGATGC TGAATTTCAA TAACTCCATT GGTTTCAGCA CCTATGTGAT CGGTAAAAGC ACCCTGGAAG AGATCATCAA ACCTTCCGGC GTCAGCGATA AACTCTGGCT GATCCCTTCC GGTCCGATAC CGCCCAACCC GGCAGAATTG CTGCTGATGG ATAAGACACA GAAGCTTTTC ACTCACCTGC GCACCCTCTT TGATTATATC ATCGTGGATA CGGCGCCGAT TGGTCTGGTA ACGGACGCAC AGCTGCTGGG ACGTTTTGCA GATGCTACCC TCTATCTCGT AAGACAGAGT TTCACCTACA AACAGCAGCT CACCATTACC AAAGATCTCT ATCAGCATAG GAAAATGCCG AAGATCAACC TGATCGTGAA CGACGTGAAA ACCGGCGCCG GATATGGTTA TGGTTACGGA TATGGCTATG GATACGGTTA TGGATATGGT AATGAGCAGC CAAGCAAAGG GATTTTCAGG AGGGTCAGAA AGCCGGTAAC GAAATAA
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Protein sequence | MINDIHKNGA SRNNHASSAD FENEEEGLDL RKIVDKMIRY WYLFVICIIA GIACAVLYMR YATPSYKISA KVLVQDDKKN GNVPGAEILE QLEMFSSKSN VDNEVEILKS RSLMEKVVRD LDLNVSYFVE GRVKKTEQFI RLPFKFKWLY LKDTLEQSSY VVKMLDNNKL SLSTKGIHRE AAWNDTFHLP EGIVKLERNE FYPILNKEYQ IRVTSFDYAV GRYQKLLDIS IPNKQASTIN LVLTNTIPEK GELILNKLLQ TYLSASVEDK NRIVDSTISF IDNRLGIVTR ELTSVEKDIE QFKQSNQLAN LEEQSKLLVS NTGDYMKQLT EQQVRMNVVE SLEQYMRDEQ NARRVVPSSL IVQDPTFLGI VEKYNALLLE RERLLMSSTE SNPVVKNMDL QLSGLRADLR NNLASLKQGI QVSIDELERN NGHISQKIRE VPGKERIFLD YSRQQAVKQE LYLFLLKKRE ESAISKSSNI AVARVIDAGK SDPVPFKPKG SVIYIIGFIA GLVFPTLWIY LQGLLGRRIS NKQDILNNTP VPILAEIGHN KDKDIIVVGR ESRTPIAEQF RAIRTNLQFI LSNEGDKVVM LTSSMSGEGK SFVATNLAAV LSLSGKKVLL MEMDLRKPKI SQMLNFNNSI GFSTYVIGKS TLEEIIKPSG VSDKLWLIPS GPIPPNPAEL LLMDKTQKLF THLRTLFDYI IVDTAPIGLV TDAQLLGRFA DATLYLVRQS FTYKQQLTIT KDLYQHRKMP KINLIVNDVK TGAGYGYGYG YGYGYGYGYG NEQPSKGIFR RVRKPVTK
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