Gene Cpin_4764 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4764 
Symbol 
ID8360940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5939642 
End bp5942038 
Gene Length2397 bp 
Protein Length798 aa 
Translation table11 
GC content48% 
IMG OID644966915 
Productcapsular exopolysaccharide family 
Protein accessionYP_003124400 
Protein GI256423747 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0489] ATPases involved in chromosome partitioning 
TIGRFAM ID[TIGR01007] capsular exopolysaccharide family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000328255 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.519364 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAACG ATATTCATAA AAACGGAGCC TCCAGAAATA ACCACGCATC GTCAGCTGAT 
TTCGAGAACG AAGAAGAAGG TCTCGACCTC AGAAAGATAG TCGATAAGAT GATCAGATAC
TGGTACCTCT TCGTGATCTG TATCATAGCA GGCATCGCAT GCGCTGTACT TTATATGCGC
TACGCCACGC CAAGCTATAA GATCAGCGCC AAAGTACTGG TACAGGATGA TAAGAAAAAT
GGAAATGTAC CCGGCGCCGA AATCCTGGAA CAGCTGGAAA TGTTTTCCAG TAAAAGCAAT
GTGGACAATG AAGTTGAAAT ACTCAAGTCC CGTTCGCTCA TGGAAAAAGT AGTACGCGAC
CTCGACCTGA ACGTCAGCTA CTTCGTAGAA GGCCGCGTCA AGAAAACAGA ACAGTTCATC
CGCCTGCCGT TTAAATTCAA ATGGCTGTAC CTGAAAGATA CCCTGGAGCA ATCGAGCTAC
GTAGTCAAAA TGCTCGACAA CAATAAACTC AGCCTCAGCA CCAAAGGTAT TCACAGGGAA
GCGGCCTGGA ACGACACCTT TCACCTGCCG GAAGGTATCG TGAAACTGGA ACGTAACGAA
TTCTATCCCA TTCTTAATAA AGAATACCAG ATCAGGGTCA CCTCCTTTGA TTATGCAGTA
GGCCGTTACC AGAAACTCCT GGACATCAGT ATTCCAAATA AACAGGCTAG TACCATCAAC
CTGGTACTGA CCAATACCAT CCCGGAGAAA GGAGAACTGA TACTTAATAA ACTGCTCCAG
ACTTACCTCA GCGCCAGCGT AGAGGATAAG AACAGGATTG TAGACAGCAC GATCTCCTTT
ATTGATAACA GACTCGGGAT CGTTACCCGC GAACTGACCA GCGTAGAAAA GGATATCGAA
CAGTTTAAAC AATCCAATCA GCTGGCCAAC CTGGAAGAAC AATCCAAATT GCTGGTTTCC
AATACAGGCG ATTATATGAA ACAGCTCACC GAACAGCAGG TGAGAATGAA TGTAGTAGAG
TCGCTGGAAC AATATATGCG GGATGAACAG AACGCCAGAA GGGTCGTACC ATCCTCCCTC
ATCGTACAGG ATCCTACCTT CCTGGGTATT GTAGAGAAAT ACAACGCACT GCTCCTGGAA
AGGGAAAGAC TGCTGATGTC CAGTACAGAG TCTAACCCAG TTGTGAAGAA TATGGATCTG
CAACTGAGTG GTCTGCGGGC AGACCTCCGG AATAACCTCG CCTCCCTCAA ACAGGGTATA
CAGGTGAGTA TCGATGAATT GGAACGCAAT AATGGCCATA TCAGCCAGAA GATCCGGGAG
GTGCCTGGTA AAGAACGCAT CTTCCTCGAT TATTCCCGTC AGCAGGCAGT GAAACAGGAG
CTCTACCTGT TTCTGCTTAA AAAGCGGGAA GAATCTGCGA TCTCCAAGTC TTCCAATATA
GCAGTCGCAA GAGTAATAGA CGCCGGTAAA AGCGATCCTG TGCCCTTTAA ACCGAAAGGT
TCCGTTATTT ATATTATCGG CTTCATCGCC GGTCTGGTGT TCCCGACGCT GTGGATCTAC
CTGCAGGGCC TTCTGGGACG CCGTATCAGC AACAAACAGG ATATCCTCAA TAATACCCCG
GTGCCTATTC TTGCGGAAAT CGGGCATAAC AAAGACAAAG ATATCATCGT GGTGGGCCGC
GAATCCAGAA CGCCGATCGC CGAGCAGTTC AGGGCTATCC GTACCAACCT GCAGTTTATA
CTCTCCAATG AGGGGGATAA GGTGGTCATG CTGACCTCCA GCATGAGCGG TGAGGGTAAA
TCATTCGTCG CCACCAACCT GGCAGCCGTA CTGTCCTTAT CGGGCAAGAA AGTGCTGCTC
ATGGAAATGG ACCTCCGCAA ACCCAAGATC TCACAGATGC TGAATTTCAA TAACTCCATT
GGTTTCAGCA CCTATGTGAT CGGTAAAAGC ACCCTGGAAG AGATCATCAA ACCTTCCGGC
GTCAGCGATA AACTCTGGCT GATCCCTTCC GGTCCGATAC CGCCCAACCC GGCAGAATTG
CTGCTGATGG ATAAGACACA GAAGCTTTTC ACTCACCTGC GCACCCTCTT TGATTATATC
ATCGTGGATA CGGCGCCGAT TGGTCTGGTA ACGGACGCAC AGCTGCTGGG ACGTTTTGCA
GATGCTACCC TCTATCTCGT AAGACAGAGT TTCACCTACA AACAGCAGCT CACCATTACC
AAAGATCTCT ATCAGCATAG GAAAATGCCG AAGATCAACC TGATCGTGAA CGACGTGAAA
ACCGGCGCCG GATATGGTTA TGGTTACGGA TATGGCTATG GATACGGTTA TGGATATGGT
AATGAGCAGC CAAGCAAAGG GATTTTCAGG AGGGTCAGAA AGCCGGTAAC GAAATAA
 
Protein sequence
MINDIHKNGA SRNNHASSAD FENEEEGLDL RKIVDKMIRY WYLFVICIIA GIACAVLYMR 
YATPSYKISA KVLVQDDKKN GNVPGAEILE QLEMFSSKSN VDNEVEILKS RSLMEKVVRD
LDLNVSYFVE GRVKKTEQFI RLPFKFKWLY LKDTLEQSSY VVKMLDNNKL SLSTKGIHRE
AAWNDTFHLP EGIVKLERNE FYPILNKEYQ IRVTSFDYAV GRYQKLLDIS IPNKQASTIN
LVLTNTIPEK GELILNKLLQ TYLSASVEDK NRIVDSTISF IDNRLGIVTR ELTSVEKDIE
QFKQSNQLAN LEEQSKLLVS NTGDYMKQLT EQQVRMNVVE SLEQYMRDEQ NARRVVPSSL
IVQDPTFLGI VEKYNALLLE RERLLMSSTE SNPVVKNMDL QLSGLRADLR NNLASLKQGI
QVSIDELERN NGHISQKIRE VPGKERIFLD YSRQQAVKQE LYLFLLKKRE ESAISKSSNI
AVARVIDAGK SDPVPFKPKG SVIYIIGFIA GLVFPTLWIY LQGLLGRRIS NKQDILNNTP
VPILAEIGHN KDKDIIVVGR ESRTPIAEQF RAIRTNLQFI LSNEGDKVVM LTSSMSGEGK
SFVATNLAAV LSLSGKKVLL MEMDLRKPKI SQMLNFNNSI GFSTYVIGKS TLEEIIKPSG
VSDKLWLIPS GPIPPNPAEL LLMDKTQKLF THLRTLFDYI IVDTAPIGLV TDAQLLGRFA
DATLYLVRQS FTYKQQLTIT KDLYQHRKMP KINLIVNDVK TGAGYGYGYG YGYGYGYGYG
NEQPSKGIFR RVRKPVTK