| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4755 |
|---|
| Symbol | |
|---|
| ID | 8360931 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 5928896 |
|---|
| End bp | 5930386 |
|---|
| Gene Length | 1491 bp |
|---|
| Protein Length | 496 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644966906 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003124391 |
|---|
| Protein GI | 256423738 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.0667593 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTATCA GGATCCTGCA AGTGGCGTTT TGGCTGTTTT TCTCTCTTGT ATGCGCCTCA
GACGCCAGTA AGGTATACGC ATTATCCGTC TACAAACCTG TGGCTATCGA CGTCAGGGCA
CTTGGCGCCA AAGGCGACGG TACAACAGAT GATAGTAAAG CGATTCAGCA GGCATTGAAT
CAGGCAGCAA CGGCAAGTGA CAAGATCGTG TCATTCCCCG CAGGGCAGTA CCTGATCAGC
CAGACGCTCC GGACGGCTGC TGCAGGTACA CGGATGGTCT TCGCGAAAGG AGCATCACTC
AAACTGGCCA ATAATACCAA TGGCGGTATC CTTATTCTGA ATGATAACTG TAGTGTTGAA
AACGCCACCT TGCAGGGAAA TGGTCAGTCG GCCCCCGACC TGTATAAAGG CTACGGTATC
GCCTTATCAG CGGTATCCAA CAGTACCGTC AAGAACTGCA TATTTACCGG TATCAGTGGC
TTCAATATAT TTCTGAACAG GAATGGTAAT AAAGGATGTA ACAAATGCGT GATTACAGGT
AATACCATCA AATCGCCTGC ATTATCACTC CCTAAAGGGT ATGATGGCAG CGGTATCATG
ATCGGGTATT CCGGAACAGG CTATGCACAT ACAGACAATG AAGTCAGTAA CAATACGATT
GACGGCGCAC AGACACTGGG ACATGGTATT GCCGTCATGA CCCATGGCTC CGGCAATAAG
ATCATTGGTA ACACTATCAG TAATTGTCTG CGTTACGGGA TCATTTCCTA CGAGACCAGT
TATGAAGATT CCACTTTATT CACGACTGCT ATCATCAACA ACACGGTCAG CAATATCGGC
GCAAAAGACG GTACTACCAA TAACATGGGA ATGGGTATTT ATGTCATGAA AACGCATGGC
GCGATCGTGA AAGGGAATAA AGTGAGCAAT ACACTGATCA ATTCAGATAA TACGGAAACG
CTGGGAAGGG GCGCTATTAC AGTCAGTGGG GGCGTAGGTT GCACGGTTGA GAATAATACG
ATTACCAATT CCGGTAGGTA TGGTATTGTG TGCATTTATG GCTTCAATAC GTCCATCAGG
AATAACAAGA TACTCGGCGT AAAAGAATCG GGTATTTACA TGCGGAATAC CAATGGAAAT
GTGATCGAAG GCAATGAATT CAGGGATATC GCTAAACTGG CCATCCGCGG ACAATTTGGT
AATACCGGCA GACCCGCTTA TTCCTCCAAT GGTTTCCTGA AACGGTTCAG AAATATACCG
ACAGGCGAAA ATATTCGTAT TGCCAACAAT AAATTTTATG GTACATCTAC CAATGTCATC
AACCTGGTAG GGGAAGATGA TAAAACAAGC CAGGGATATA ATAATCAGCT GAAAGACCTG
GATATACAGG ATAATCAGCT GATAGGGAAT AAGAATACGA TAGACAATTC CATCAAAGTA
TCAAATGTGG CGCCCGGTGG CAGCAGGATC ATGAGGAACC GGAATAATTA G
|
|---|
| Protein sequence | MTIRILQVAF WLFFSLVCAS DASKVYALSV YKPVAIDVRA LGAKGDGTTD DSKAIQQALN
QAATASDKIV SFPAGQYLIS QTLRTAAAGT RMVFAKGASL KLANNTNGGI LILNDNCSVE
NATLQGNGQS APDLYKGYGI ALSAVSNSTV KNCIFTGISG FNIFLNRNGN KGCNKCVITG
NTIKSPALSL PKGYDGSGIM IGYSGTGYAH TDNEVSNNTI DGAQTLGHGI AVMTHGSGNK
IIGNTISNCL RYGIISYETS YEDSTLFTTA IINNTVSNIG AKDGTTNNMG MGIYVMKTHG
AIVKGNKVSN TLINSDNTET LGRGAITVSG GVGCTVENNT ITNSGRYGIV CIYGFNTSIR
NNKILGVKES GIYMRNTNGN VIEGNEFRDI AKLAIRGQFG NTGRPAYSSN GFLKRFRNIP
TGENIRIANN KFYGTSTNVI NLVGEDDKTS QGYNNQLKDL DIQDNQLIGN KNTIDNSIKV
SNVAPGGSRI MRNRNN
|
|---|
| |