| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4753 |
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| Symbol | |
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| ID | 8360929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5926674 |
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| End bp | 5927711 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644966904 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_003124389 |
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| Protein GI | 256423736 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.447789 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0884742 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAAAG ATAAATGCCT GCTTATTACC GGTGGTACAG GTTCCTTCGG AAACGCTGTA
CTCAAAAGGT TTTTACATAC AGATATCAGG GAAATCAGAA TCTTCAGCCG TGATGAGAAA
AAGCAGGACG ATATGCGTAA CCTGCTACGT AGCGATAAGG TGAAATTCTT TATGGGAGAT
GTCCGCGACT TCCGTAGTAT CGATAATGCC ATGGATGGTG TAGATTATGT ATTCCATGCC
GCTGCTTTGA AACAGGTACC TTCCTGTGAG TTCTATCCCA TGGAGGCCGT GCGTACAAAT
GTACTGGGTA CGGAGAATGT GGTAGAGGCA GCCATCAAAC ATAAAATAGA AAAGCTGATC
TGTCTGGGTA CAGACAAGGC AGTTTATCCC ATCAACGCCA TGGGTATTTC CAAAGCGATG
ATGGAAAAGG TGGCGATTTC TAAAGCCAGA TTACACAACA AACCATTGAT CACCTGTACC
CGATACGGTA ACGTAATGGC CAGCAGAGGT TCGGTGATTC CGTTGTTTAT TTCGCAGATC
AAGGCAGGCT TGCCATTAAC CATTACCGAT CCGAAAATGA CACGTTTTAT GATGTCATTG
GATAATGCGG TGGAACTGGT ACTCTTTGCC TATAAGAACG CTAATCCGGG TGATATCTTC
GTACAGAAGG CGCCAGCATC TACCATCGGT CAGCTGGCCC GTGTGCTGAT AGAACTGTTT
GAATCCAGGA GTGAGATCAA TGTGATCGGT ACCCGTCACG GAGAAAAACT CTATGAGACA
TTACTGACCC GTGAAGAGTT TGGCAAGGCG GAAGATATGG GTGAATTTTA TCGTATCGCT
GCGGATGACA GGGATCTTAA TTATGCGAAA TATTTCTCCG AAGGAAATGA GCGCATAGCA
GAGGCGCAGG ACTATCATTC ACACAATACA TACCGTCTCT CAGACGAAGA ACTGCGCGCT
ATGCTGCTGA AACTCGATTA TGTACAGGAA CAATTAAGTA ATAGCCATGT CGGAGAAGGT
GAATTATATA AAGGGTAA
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| Protein sequence | MFKDKCLLIT GGTGSFGNAV LKRFLHTDIR EIRIFSRDEK KQDDMRNLLR SDKVKFFMGD
VRDFRSIDNA MDGVDYVFHA AALKQVPSCE FYPMEAVRTN VLGTENVVEA AIKHKIEKLI
CLGTDKAVYP INAMGISKAM MEKVAISKAR LHNKPLITCT RYGNVMASRG SVIPLFISQI
KAGLPLTITD PKMTRFMMSL DNAVELVLFA YKNANPGDIF VQKAPASTIG QLARVLIELF
ESRSEINVIG TRHGEKLYET LLTREEFGKA EDMGEFYRIA ADDRDLNYAK YFSEGNERIA
EAQDYHSHNT YRLSDEELRA MLLKLDYVQE QLSNSHVGEG ELYKG
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