Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4752 |
Symbol | |
ID | 8360928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 5926247 |
End bp | 5926705 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644966903 |
Product | hypothetical protein |
Protein accession | YP_003124388 |
Protein GI | 256423735 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.101937 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.109105 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGAGA AGGTGAATTA TATAAAGGGT AATCAGTTCA GCGACCATCG GGGTTCGCTG CAATTTGTAA ATGACTTCAC CTTTCCGGAT GTACAACGTT TTTACCAGAT CACCCATCCG GATGCAGCGG TTATCCGTGC CTGGCAGGGG CACAAGATAG AAGAGAAGTT CTTTTATGTG GTGAAAGGAC GCTTTGTGAT CGCCTGGGTA GAAGTGGACG ACTGGGAGCA GCCTTCATCC GATCTGCCGG CGGAACATGT TATACTTGAA GAAGGAACGC CGGCAGTGTT ACACATCCCT GCCGGTTATG CCAATGGTAT TAAAGCATTG GAACCGGGAT CCGTACTGAT GGTCTATTCA AATCTTAACC TGGAAGCATC TGCCGCTGAC CGCTGGTCAT TTGATCAGCA CTTATGGTTT GACTGGCAGC AGGCAACTGC TCATATCACT ACTGCATGA
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Protein sequence | MSEKVNYIKG NQFSDHRGSL QFVNDFTFPD VQRFYQITHP DAAVIRAWQG HKIEEKFFYV VKGRFVIAWV EVDDWEQPSS DLPAEHVILE EGTPAVLHIP AGYANGIKAL EPGSVLMVYS NLNLEASAAD RWSFDQHLWF DWQQATAHIT TA
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