Gene Cpin_4752 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4752 
Symbol 
ID8360928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5926247 
End bp5926705 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content49% 
IMG OID644966903 
Producthypothetical protein 
Protein accessionYP_003124388 
Protein GI256423735 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.101937 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.109105 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGAGA AGGTGAATTA TATAAAGGGT AATCAGTTCA GCGACCATCG GGGTTCGCTG 
CAATTTGTAA ATGACTTCAC CTTTCCGGAT GTACAACGTT TTTACCAGAT CACCCATCCG
GATGCAGCGG TTATCCGTGC CTGGCAGGGG CACAAGATAG AAGAGAAGTT CTTTTATGTG
GTGAAAGGAC GCTTTGTGAT CGCCTGGGTA GAAGTGGACG ACTGGGAGCA GCCTTCATCC
GATCTGCCGG CGGAACATGT TATACTTGAA GAAGGAACGC CGGCAGTGTT ACACATCCCT
GCCGGTTATG CCAATGGTAT TAAAGCATTG GAACCGGGAT CCGTACTGAT GGTCTATTCA
AATCTTAACC TGGAAGCATC TGCCGCTGAC CGCTGGTCAT TTGATCAGCA CTTATGGTTT
GACTGGCAGC AGGCAACTGC TCATATCACT ACTGCATGA
 
Protein sequence
MSEKVNYIKG NQFSDHRGSL QFVNDFTFPD VQRFYQITHP DAAVIRAWQG HKIEEKFFYV 
VKGRFVIAWV EVDDWEQPSS DLPAEHVILE EGTPAVLHIP AGYANGIKAL EPGSVLMVYS
NLNLEASAAD RWSFDQHLWF DWQQATAHIT TA