| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4750 |
|---|
| Symbol | |
|---|
| ID | 8360926 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 5923957 |
|---|
| End bp | 5925108 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644966901 |
|---|
| Product | UDP-N-acetylglucosamine 2-epimerase |
|---|
| Protein accession | YP_003124386 |
|---|
| Protein GI | 256423733 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0381] UDP-N-acetylglucosamine 2-epimerase |
|---|
| TIGRFAM ID | [TIGR00236] UDP-N-acetylglucosamine 2-epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0119987 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.0544101 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAACA CAATGAAGAA ACTGAAAGTA CTGACTGTTG TAGGAACCCG CCCGGAAATT
ATACGTTTGG CCAGAGTGCT GGCGAAACTG GATGAATCTG AAGCTATCGA ACATGTGCTG
GTGCATACGG GACAAAATTA TGATTATGAG CTGAATCAGA TCTTCTTTGA AGACCTGGGA
CTGCGTAAAC CTGATCACTT CCTGGAAGCG GCAGGAAAGA CTGCCACGGA AACAATCGGG
CAGATCCTCA TTAAGATCGA TCCGGTACTG GAAGCAGAAC AGCCGGATGC TTTTCTTGTA
CTGGGAGATA CGAACAGCTG TCTTTGTGCT ATCCCGGCCA AGAAAAGAAG GATCCCGATT
TTTCATATGG AAGCGGGAAA CCGCTGTTTT GATCAACGCG TACCGGAAGA GACAAACCGG
AAGATCGTAG ATCATATCAG CGATATCAAC CTGACTTATT CCGATATCGC AAGAGAGTAT
CTGCTCCGGG AAGGATTGCC GCCGGACAGG GTGATAAAAA CAGGTAGTCC GATGTACGAA
GTGCTGCATC ATTATCTGCC TAAAGTAAAA CAATCAGGGA TACTGACCAC CCTGGAGTTG
CAGGAACAAC AATACTTTGT GGTGTCTGCA CACAGGGAAG AGAATATTAA TTCAGACAGG
AATTTCGATC ACCTGGTGAC GACGTTAAAT GGTATTGCAA AGCAGTTTGG TCAACCGGTG
ATCGTCTCTG CCCATCCGCG CACCAGGAAG ATGATTGATG CAAAGGGCGT GACTTTTGAT
CCTTTGGTAA GATTGATGAA ACCCATGGGA CTGAGTGATT ATATCGCTTT GCAGTTACAT
GCAAAAGCGG TGTTGTCAGA CAGTGGCACG ATATCCGAAG AGTCGTCTAT CCTGAATTTT
CCCGCGTTGA ACATCCGGGA AGCGCATGAA CGTCCGGAAG CAATGGAAGA GGCTTCTGTG
ATGATGGTGG GACTGAATCC GGAGCGGATT ATGCAGGGAC TGGTAGAGCT GGCGTCACAG
CGAAGAGGGA CGGAACGCAC CTTGCGGGAA GTGGGGGATT ACAGCATGCC GAATGTATCA
GATAAAGTGG TGAGAATTAT TCTGTCTTAT ACTGATTATG TAAACAGGGT TGTATGGAGC
AAAAATCAGT GA
|
|---|
| Protein sequence | MSNTMKKLKV LTVVGTRPEI IRLARVLAKL DESEAIEHVL VHTGQNYDYE LNQIFFEDLG
LRKPDHFLEA AGKTATETIG QILIKIDPVL EAEQPDAFLV LGDTNSCLCA IPAKKRRIPI
FHMEAGNRCF DQRVPEETNR KIVDHISDIN LTYSDIAREY LLREGLPPDR VIKTGSPMYE
VLHHYLPKVK QSGILTTLEL QEQQYFVVSA HREENINSDR NFDHLVTTLN GIAKQFGQPV
IVSAHPRTRK MIDAKGVTFD PLVRLMKPMG LSDYIALQLH AKAVLSDSGT ISEESSILNF
PALNIREAHE RPEAMEEASV MMVGLNPERI MQGLVELASQ RRGTERTLRE VGDYSMPNVS
DKVVRIILSY TDYVNRVVWS KNQ
|
|---|
| |