Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4746 |
Symbol | |
ID | 8360922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 5920307 |
End bp | 5920852 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644966897 |
Product | transferase hexapeptide repeat containing protein |
Protein accession | YP_003124382 |
Protein GI | 256423729 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
TIGRFAM ID | [TIGR03570] sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00152727 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0166501 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAACT GTCTTATTTA TGGCACGGGA GGACATGCAT TGACAGTAGA ATCGCTGGCG GTGAAAAATA ATTATGAGGT TGCTGCTTTC TTTGATGATA ATGCGAATAT CGATCACACA TACAGACAAA AGGCGGTCGT GCCGTATGAT GTTGGATGGT TGCCTGATTG TCCGCTGGTC GTTGCAGTCG GTAATAACGC AGTAAGAAAA AAAATTGTTT CATTTGTAGC ACATAAATAT TGTACATTTA TTGACAACGC CGCTTTTATC ACCCATGATG TGCGTATCGG AGAAGGTACA GTAGTAATGC CTGGCGCGAT TGTACAGGCA GGCGTAAATA TCGGACGGCA TGTTATCCTC AACATCGGTT GTGCCGTAGA TCATGAAGCT TCAATCGGCG ATTTTGCACA TATTGGCCCC AGATGTTATA TCGGTGGTGG AGCGGTTATC GGTGAAGGTG TTACGATTGG CGCCGGCGCT GTAGTTATGA GAAACGTTAA AATTGAAGAC TGGACGAATA TTCCTCCCCT CAGTGTTATT ACCTGA
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Protein sequence | MDNCLIYGTG GHALTVESLA VKNNYEVAAF FDDNANIDHT YRQKAVVPYD VGWLPDCPLV VAVGNNAVRK KIVSFVAHKY CTFIDNAAFI THDVRIGEGT VVMPGAIVQA GVNIGRHVIL NIGCAVDHEA SIGDFAHIGP RCYIGGGAVI GEGVTIGAGA VVMRNVKIED WTNIPPLSVI T
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