Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4742 |
Symbol | |
ID | 8360918 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 5916115 |
End bp | 5916435 |
Gene Length | 321 bp |
Protein Length | 106 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644966894 |
Product | SWIB/MDM2 domain protein |
Protein accession | YP_003124379 |
Protein GI | 256423726 |
COG category | [B] Chromatin structure and dynamics |
COG ID | [COG5531] SWIB-domain-containing proteins implicated in chromatin remodeling |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.166438 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.00240226 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCCTACTT CAAAACAAAC GACAGCAAAA CCAGCAGCAA AAACCACTAC AAAAGCAGCT CCTGCAAAAG AAGGCGGTGG CAAAGGATTG AAAGCCCCAC TGACTCCAAG CGCAGATCTG GCAGCAGTTA TCGGTAGTGA TCCGCTGCCA AGAACAGAGA TCACTAAAAA GATCTGGGAT TACATTAAAG AACACAATCT GCAGGATGCC CAGAATAAAC GCCTGATCAA CGCAGATGAA AAACTGAAGA AAGTATTCAA CGGTAAAGAC CAGATCTCTA TGTTCGAACT GGCCAAAGAA ATGAATCAGC ACGTTAAATA A
|
Protein sequence | MPTSKQTTAK PAAKTTTKAA PAKEGGGKGL KAPLTPSADL AAVIGSDPLP RTEITKKIWD YIKEHNLQDA QNKRLINADE KLKKVFNGKD QISMFELAKE MNQHVK
|
| |