Gene Cpin_4742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4742 
Symbol 
ID8360918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5916115 
End bp5916435 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content44% 
IMG OID644966894 
ProductSWIB/MDM2 domain protein 
Protein accessionYP_003124379 
Protein GI256423726 
COG category[B] Chromatin structure and dynamics 
COG ID[COG5531] SWIB-domain-containing proteins implicated in chromatin remodeling 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.166438 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.00240226 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCTACTT CAAAACAAAC GACAGCAAAA CCAGCAGCAA AAACCACTAC AAAAGCAGCT 
CCTGCAAAAG AAGGCGGTGG CAAAGGATTG AAAGCCCCAC TGACTCCAAG CGCAGATCTG
GCAGCAGTTA TCGGTAGTGA TCCGCTGCCA AGAACAGAGA TCACTAAAAA GATCTGGGAT
TACATTAAAG AACACAATCT GCAGGATGCC CAGAATAAAC GCCTGATCAA CGCAGATGAA
AAACTGAAGA AAGTATTCAA CGGTAAAGAC CAGATCTCTA TGTTCGAACT GGCCAAAGAA
ATGAATCAGC ACGTTAAATA A
 
Protein sequence
MPTSKQTTAK PAAKTTTKAA PAKEGGGKGL KAPLTPSADL AAVIGSDPLP RTEITKKIWD 
YIKEHNLQDA QNKRLINADE KLKKVFNGKD QISMFELAKE MNQHVK