| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4737 |
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| Symbol | |
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| ID | 8360913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5911077 |
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| End bp | 5912624 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644966889 |
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| Product | sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_003124374 |
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| Protein GI | 256423721 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0920124 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.000878873 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATTTGT TAGCGTTGAT AGAACTGTTA TTACCGGAAG GGACATTGCC GGAAATACAG
TCTGAGAATG GACATGTAGA CTGGAGAGGA GCAATCGGGT CGATCAGGAA TGAAAATGAT
CTTTTTGCAT TTATTCATAC TGTGTTGCGT CCTTACCTGC ATACGATCTC TGTATTGATT
GGTATCGCTG ACGGAAATGG GACGATCAGT CGCTGGTGCC ACAAAACAGA GGGGTTAACC
TTACTGCCGC TACCTCAGAA GGTAAGCGAG CATTTTATGC AGGACAATAT TTCAGGGGTA
CTGGAGATGT ATGCGCCTGA CAGAAGGTCA GCTTTACAGA CGACTCTTTT CAATAGTGGG
GTGCGGGAGA TGCTGATACT GCCTTTGCGT AACCATACCA ATAGCTTTGG TTTTTTATGT
CTGCTGGCTA AACATCATAA TACCTTCCCC AAATCATTGC AGATCTCCGT GAAACGTTAC
GCCGGACTGC TTTCTGCCGC CACCCTGAAA CTGATGTTGC TGGACGCCTT GCCGCAATGG
TTGCAGGAGG AGGATATGGG CGGTGACGGC GCTGAACTGC TATTGTATAA TGATCTGCTG
CCGGCGAAGC TGGTCAGTGG GATCGCTTTA CGTCCGGTGA TACAACAGGT CAGGCAGGTC
GCGCCTACAG ATGCGACGGT GCTGCTGACC GGAGAAACGG GCACTGGTAA GGAGCTATTT
GCAGAGGCCA TCCACCTTTC TTCTATGCGC AGGCAGAAAG CCTTCGTCAA AATCAATTGT
GCCGCATTGC CACCCCAGCT CATAGAGTCG GAGTTGTTCG GTCATGAGAA AGGGGCATTT
ACAGGCGCTA TTCACCGCCG TATCGGCAAA TTTGAGATGG CGGAAGGCGG TACCCTTTTC
CTCGATGAAA TCGGCGAATT ACCCCTTGAT ATGCAGGCGA AACTACTGCG TGTGATCCAG
GAGAAGGAAA TTGAACGTAT CGGAGGGACG GAGACCATTC CCGTCAATGT GCGTATTATT
GCGGCCACCA ACAGGACATT GGAAGAAGAA GTGAGACAGG GGCGTTTCCG TCAGGACCTG
TATTACCGTT TATACGTATT TCCCATACAC CTGCCGGCCC TGCGGGAGCG CAGGGAAGAC
ATTCCATTGT TGTTACAGCA TTTTGCCCGC AATGCCGCTA TGAAGTATGG AAAACCCATA
CGGCATATTG CATCCGGATC CGTGCTGGCA CTGATGGATT ATACCTGGCC GGGAAATATC
CGGGAAATGG AACACATGGT AGAACGCGCA GTTATTTCAA GTGACGAACC ACAGATTACC
ATCGCTGTTC CCGGAAACCG AAAAGCATTG GAGGCAGATG GTAATAGTCT GTCGCCGTTG
CTTACGCTGG CGGAAACAGA ACGGCAGACC ATTATCAGGG CGCTTCGTTA TTCCAATGGC
AGGATCAGAG GTCCGCAGGG CGCTGCAGAT CTTCTGGATA TCAAACCTAC CACGCTGGAA
GCGCGGATGA AAAAGCTGGG TATTGTGAAG GAACATGTTG TGCGCTAA
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| Protein sequence | MDLLALIELL LPEGTLPEIQ SENGHVDWRG AIGSIRNEND LFAFIHTVLR PYLHTISVLI
GIADGNGTIS RWCHKTEGLT LLPLPQKVSE HFMQDNISGV LEMYAPDRRS ALQTTLFNSG
VREMLILPLR NHTNSFGFLC LLAKHHNTFP KSLQISVKRY AGLLSAATLK LMLLDALPQW
LQEEDMGGDG AELLLYNDLL PAKLVSGIAL RPVIQQVRQV APTDATVLLT GETGTGKELF
AEAIHLSSMR RQKAFVKINC AALPPQLIES ELFGHEKGAF TGAIHRRIGK FEMAEGGTLF
LDEIGELPLD MQAKLLRVIQ EKEIERIGGT ETIPVNVRII AATNRTLEEE VRQGRFRQDL
YYRLYVFPIH LPALRERRED IPLLLQHFAR NAAMKYGKPI RHIASGSVLA LMDYTWPGNI
REMEHMVERA VISSDEPQIT IAVPGNRKAL EADGNSLSPL LTLAETERQT IIRALRYSNG
RIRGPQGAAD LLDIKPTTLE ARMKKLGIVK EHVVR
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