| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4734 |
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| Symbol | |
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| ID | 8360910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5908008 |
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| End bp | 5909294 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644966886 |
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| Product | nucleotide sugar dehydrogenase |
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| Protein accession | YP_003124371 |
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| Protein GI | 256423718 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0677] UDP-N-acetyl-D-mannosaminuronate dehydrogenase |
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| TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.740891 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.000167734 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATAGCAG TTATCGGCTT AGGCTATGTG GGCCTCCCCC TTGCAATTGA GTTTGCCAGA
AAGTATAAAG TGCTGGGCTT TGATATCAAC GCTGCGCGCG TCCATGAACT GTGCAACGAA
CAGGATAAAA CCCGTGAAGC CGACATAGAT GCCCTCCGCG AAGTACTGAA ACAAGGAGCC
AATACAGACG CCTCCGTCTC CGGCGGACTA CAGCTTTCTT CCGATAAAAA TGACCTGAAA
GCCTGTCAGA TATACATCGT TACCGTTCCC ACTCCCATAG ACCAGTTCAA ATCACCCGAT
CTCACCTTCC TGCTGGGCGC CTCCGCCATG CTGGGCACCG TACTCAAACC AGGTGATATC
GTTATTTATG AATCCACCGT ATATCCGGGA TGTACAGAAG ATGACTGCGT ACCTGTACTG
GAAGCACATT CCGGCCTACG TTACAACCAG GACTTTTTTG TAGGTTATTC GCCCGAAAGG
ATTAACCCCG GTGATAAAGT CAATACCCTC ACAAAGATCA AAAAAGTAAC CAGCGGCTCC
ACTCCGGAAA TAGCAACCCG TATCGACGAA CTATACGCTT CCATCATCAC TGCCGGTACG
CATAAAGCCC CCAGCATTAA AGTAGCAGAA GCCTCCAAAG CCATCGAAAA TGCGCAACGC
GACGTCAATA TTTCCTTTGT GAATGAACTG GCCCTGATCT TCGACCGTAT CGGTATCGAT
ACCAACGATG TCATCGAAGC AGCCGCTACT AAATGGAACT TTTTGAAATA TAAACCCGGT
CTGGTCGGTG GACACTGTAT CGGTGTAGAT CCTTATTACC TGGCACATAA AGCCGAGTCA
TTAGGATACC ATCCACAGGT TATTCTCTCC GGCAGACGCG TCAATGACCA GATGGGTTAC
TTCGTAGCCA GTAAGGTGGT TAAACTCATG ATCGAAAAAG ATCATAAGAT TAAGGGCGCT
CATGCCCTGA TCATGGGAAT CACATTTAAG GAGAATTGTC CTGATGTCCG GAATACGCGT
GTTGTTGACA TTTACCATGA ATTGAAGCAA TACGGACTTG ATGTTACGGT GTATGATCCA
TGGGCAGATC CGGAGGAAGT GAAAAAAGAA TATGGCGTGC CTACTGTCAC TAAACTGGAA
GGAACGGAAG TCTTTGACGC CATGGTGATT GCGGTGGCAC ACCGGGAATT TCTGAGCTTC
GACTTTAAAA AATTTGGCAG CAGTAATGCG GTTATTTTTG ATACCAAAGC TTGTATAGAC
AGGGATTTGG TGGATGGAAG ACTGTAA
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| Protein sequence | MIAVIGLGYV GLPLAIEFAR KYKVLGFDIN AARVHELCNE QDKTREADID ALREVLKQGA
NTDASVSGGL QLSSDKNDLK ACQIYIVTVP TPIDQFKSPD LTFLLGASAM LGTVLKPGDI
VIYESTVYPG CTEDDCVPVL EAHSGLRYNQ DFFVGYSPER INPGDKVNTL TKIKKVTSGS
TPEIATRIDE LYASIITAGT HKAPSIKVAE ASKAIENAQR DVNISFVNEL ALIFDRIGID
TNDVIEAAAT KWNFLKYKPG LVGGHCIGVD PYYLAHKAES LGYHPQVILS GRRVNDQMGY
FVASKVVKLM IEKDHKIKGA HALIMGITFK ENCPDVRNTR VVDIYHELKQ YGLDVTVYDP
WADPEEVKKE YGVPTVTKLE GTEVFDAMVI AVAHREFLSF DFKKFGSSNA VIFDTKACID
RDLVDGRL
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