Gene Cpin_4730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4730 
Symbol 
ID8360906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5904893 
End bp5905858 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content49% 
IMG OID644966882 
ProductTerpene synthase metal-binding domain protein 
Protein accessionYP_003124367 
Protein GI256423714 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0913781 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0000445956 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCCAACGA TCACCTTGCC TCGGATAATT TATCCGTTCC CCTCTCTTAT TAACCAATTT 
GTAACAGCAG CACACGAGCA AAACCGTCAA TGGGTAGCCG ATTTTGGCTT TATCACAACG
CCCGAAGCTA TGGCCCGTTT TGACAGGTCC CGTTTTGCCT GGTTAGCCGC AAGGGCATTT
CCTCATGCCG GTTTTCATGA ACTGTGTACC ATCGCCAACT TCAACACCTG GCTGTTTATG
CTGGATGACC AGTGTGATGA AGCACAACTG GGAAAGAAAG CCGTTTACCT GGAACATGTT
ACAGACGGCT TCATGAACAT ACTGAAACAT AATACACCCG TTGACACCGT GCTGGGAAGA
AGTTTCACCG ACATCTGGGA ACGTATGCAA GCCCTCGGCG ATACCGCCTG GCAGACACGT
TTCATCAGAA GTATGGAGGA ATATTTTACT TCCTGCCACT GGGAGGCCGG CAACAGAGCG
GCGGATATCG TTCCTACCGT CGCAGAATAT GTCACCATGC GCCCTTACAC CGGTGCATTG
TTCGCCGATG TGGAAGCCAT CGAGATCATA GAAAAAGTGT ATCTGCCTGC CCACATCCTC
CAACACTTTA TCGTACAGCG TCTGGTACTC GCCTGCAATA ACATCGTATG CTGGGCCAAT
GACATCTTCT CCTGCGCTAA AGAAGCCAGA CAGGGAGATG TACATAATCT CGTACTGGTA
CTACAGCATG AACGTAACAG CACCTTGCAG GAAGCTGTCA ACGAGACCGC CAGGATGCAT
AATGAAGAGG TAAAACTGTT TACCGCCCTC GAAAAACTGC TGCCTTCCTT TGGCGCGGAA
ATGGATAGGG AACTGGAGCG GTTTATGGCA GTGCTTCGCT CCTGGATTAC AGCAAATTAT
GACTGGAGTT ATCATGATAC CGGAAGGTAC CAGGTGAAAG AGGTGGAAGT AGTGATCAAT
TCCTGA
 
Protein sequence
MPTITLPRII YPFPSLINQF VTAAHEQNRQ WVADFGFITT PEAMARFDRS RFAWLAARAF 
PHAGFHELCT IANFNTWLFM LDDQCDEAQL GKKAVYLEHV TDGFMNILKH NTPVDTVLGR
SFTDIWERMQ ALGDTAWQTR FIRSMEEYFT SCHWEAGNRA ADIVPTVAEY VTMRPYTGAL
FADVEAIEII EKVYLPAHIL QHFIVQRLVL ACNNIVCWAN DIFSCAKEAR QGDVHNLVLV
LQHERNSTLQ EAVNETARMH NEEVKLFTAL EKLLPSFGAE MDRELERFMA VLRSWITANY
DWSYHDTGRY QVKEVEVVIN S