Gene Cpin_4724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4724 
Symbol 
ID8360900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5896156 
End bp5897067 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content47% 
IMG OID644966877 
Productprotein of unknown function DUF72 
Protein accessionYP_003124362 
Protein GI256423709 
COG category[S] Function unknown 
COG ID[COG1801] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.480301 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00165415 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATTTTG GTCGTGTTGA TCCGGCGCTG CTGGACGAAA TAGATTTCAA ACTGCCTGCT 
GAACCGGCGT TTAATAGAGC GGTACTCAAA GGGAAAGCAC TTAAAAAGCC GAAGATCTAT
CTTGGCTGCG CCAAATGGGG ACGTAAGGAA TGGATCGGCA AGATTTATCC TAAGGGCACC
AAAGAAGCCA ACTTCCTCGA CGAATACGTA CATCATTACA ATAGTATCGA GCTCAATGCG
ACCCATTATA AGATCTATGG ACCAGAAGCC ATCGCAAAAT GGGATGCGCG GGCAACCGGC
AAACACTTCA AGTTCTGCCC CAAAGTACCG CAATCGATCA GTCACTTCAG CAACCTCGTG
GATGCAGGTC CGCAAACCAC CTCCTTCCTG GAAGGAGTAC TGGCCTTTGG TGAACACCTC
GGCCCTATCT TTCTCCAGGT AAGCGATAAA TATTCCCCTA AACGGAAAGA TAATCTCTTT
AAATACCTGG AGAGCCTGCC CACAGATCTG CAGTTCTTCC TTGAAGTAAG ACACACGGAA
TGGTTCAGCG ATGATAAGAT CCGGGAGGAA TTGTTCAGCA CTTTAAAGAA GCTAAACGTC
GGTGCTGTCA TTACGGATAC TGCCGGCAGA AGGGATTGCG CACATATGTA CATGCCCATC
CGTAAGGCAT TTATCCGGTA TGTTGGCAAT AGCCTCCATC CTACCGACTA CGTCCGTATC
GACGACTGGG TCAACCGTAT CCATGACTGG TTACAGCACG GCTTGCAGGA ACTGTATTTC
TTTATGCATA TGCATGATGA GGCTTACTCG CCTGAGCTGA CCGTTTATAT GGTAGACAAG
TTCAAAGGGA TATGTGATAT TGAATTACAG AAGCCTGTCT TTGTTGAACA GATAAAGGGA
CTCTTCAATT GA
 
Protein sequence
MDFGRVDPAL LDEIDFKLPA EPAFNRAVLK GKALKKPKIY LGCAKWGRKE WIGKIYPKGT 
KEANFLDEYV HHYNSIELNA THYKIYGPEA IAKWDARATG KHFKFCPKVP QSISHFSNLV
DAGPQTTSFL EGVLAFGEHL GPIFLQVSDK YSPKRKDNLF KYLESLPTDL QFFLEVRHTE
WFSDDKIREE LFSTLKKLNV GAVITDTAGR RDCAHMYMPI RKAFIRYVGN SLHPTDYVRI
DDWVNRIHDW LQHGLQELYF FMHMHDEAYS PELTVYMVDK FKGICDIELQ KPVFVEQIKG
LFN