Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4724 |
Symbol | |
ID | 8360900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 5896156 |
End bp | 5897067 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644966877 |
Product | protein of unknown function DUF72 |
Protein accession | YP_003124362 |
Protein GI | 256423709 |
COG category | [S] Function unknown |
COG ID | [COG1801] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.480301 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00165415 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGATTTTG GTCGTGTTGA TCCGGCGCTG CTGGACGAAA TAGATTTCAA ACTGCCTGCT GAACCGGCGT TTAATAGAGC GGTACTCAAA GGGAAAGCAC TTAAAAAGCC GAAGATCTAT CTTGGCTGCG CCAAATGGGG ACGTAAGGAA TGGATCGGCA AGATTTATCC TAAGGGCACC AAAGAAGCCA ACTTCCTCGA CGAATACGTA CATCATTACA ATAGTATCGA GCTCAATGCG ACCCATTATA AGATCTATGG ACCAGAAGCC ATCGCAAAAT GGGATGCGCG GGCAACCGGC AAACACTTCA AGTTCTGCCC CAAAGTACCG CAATCGATCA GTCACTTCAG CAACCTCGTG GATGCAGGTC CGCAAACCAC CTCCTTCCTG GAAGGAGTAC TGGCCTTTGG TGAACACCTC GGCCCTATCT TTCTCCAGGT AAGCGATAAA TATTCCCCTA AACGGAAAGA TAATCTCTTT AAATACCTGG AGAGCCTGCC CACAGATCTG CAGTTCTTCC TTGAAGTAAG ACACACGGAA TGGTTCAGCG ATGATAAGAT CCGGGAGGAA TTGTTCAGCA CTTTAAAGAA GCTAAACGTC GGTGCTGTCA TTACGGATAC TGCCGGCAGA AGGGATTGCG CACATATGTA CATGCCCATC CGTAAGGCAT TTATCCGGTA TGTTGGCAAT AGCCTCCATC CTACCGACTA CGTCCGTATC GACGACTGGG TCAACCGTAT CCATGACTGG TTACAGCACG GCTTGCAGGA ACTGTATTTC TTTATGCATA TGCATGATGA GGCTTACTCG CCTGAGCTGA CCGTTTATAT GGTAGACAAG TTCAAAGGGA TATGTGATAT TGAATTACAG AAGCCTGTCT TTGTTGAACA GATAAAGGGA CTCTTCAATT GA
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Protein sequence | MDFGRVDPAL LDEIDFKLPA EPAFNRAVLK GKALKKPKIY LGCAKWGRKE WIGKIYPKGT KEANFLDEYV HHYNSIELNA THYKIYGPEA IAKWDARATG KHFKFCPKVP QSISHFSNLV DAGPQTTSFL EGVLAFGEHL GPIFLQVSDK YSPKRKDNLF KYLESLPTDL QFFLEVRHTE WFSDDKIREE LFSTLKKLNV GAVITDTAGR RDCAHMYMPI RKAFIRYVGN SLHPTDYVRI DDWVNRIHDW LQHGLQELYF FMHMHDEAYS PELTVYMVDK FKGICDIELQ KPVFVEQIKG LFN
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