| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4719 |
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| Symbol | |
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| ID | 8360895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5884918 |
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| End bp | 5888448 |
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| Gene Length | 3531 bp |
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| Protein Length | 1176 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644966872 |
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| Product | chromosome segregation protein SMC |
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| Protein accession | YP_003124357 |
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| Protein GI | 256423704 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1196] Chromosome segregation ATPases |
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| TIGRFAM ID | [TIGR02168] chromosome segregation protein SMC, common bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.430615 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0169056 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGTTTAA AAACATTAGA AATCAAAGGC TTCAAAAGCT TTGCTGACAA AACCGTATTA
CACTTCGACG AAGGGGTAAC AGGGGTTATA GGCCCCAACG GCTGCGGCAA AAGTAATATT
ATCGACTCCA TCCGCTGGGT GATCGGGGAG CATAAGATCA GTAATCTCCG TTCGGAGAAT
CAGTCTGGTC TTGTGTTTAA TGGCTCCAAA ACACGCTCGG CCAGTGGTAT GGCTGAAGTG
AGTCTGACGT TTGAGAACAC CCGCAATGTA CTGCCAACCG AGTTTACCAC CGTTACCATT
ACCCGTAAGT TTTACAAGAA CGGCGATAGT GAATATCGCC TGAACGATGT GGCCTGCCGC
CTCAAAGATA TCCATAACCT GTTTATGGAT ACCGGTGTCA GCACGGATTC GTATGCCATC
ATCGAACTGG GTATGGTGGA TGATATTATT AAAGATAAAG AGAACAGCCG CCGGCGTATG
CTGGAACAGG CCGCAGGTAT CTCCATTTAC AAAACCCGTA AAAAGGAAGC CAAATCCAAA
CTGGAGGCAA CCGAAGGAGA CCTGAACCGT ATTGAGGACC TGCTCTTTGA AATCAACAAC
AACTTAAAAA CCCTGGAAGC CCAGGCCCGT AAGGCGGAAC GCTTCTATGA GGTGAAGAAA
GAATACCGCG AAGTCAGTAT CGAGCTCGCG AAAGCCGCCC TGGAAGGATT CAATGTCACT
TTTAAAGAAC TGACAGATGA ACAACAGGCG GAAAGCGACA AGAAACTCGC TCTGGAAACA
GAGATAACTG CTGCCGAAGC CAGTGTGGAA GAAGATAAGC TGCATTTCGT AGCGAAAGAA
AGAGAGCTGC AGGTATTGCA GAAATCTTTC AACGAACTCG TTTCTACCAT CCGTACCAAG
GAGAATGATA AGAACCTGGC CAGCCAGCAG CTCACTTACC TGAAGGAAAG AGAGCGCAAT
ATCAGCCAGT TCCTGTCCAA CGCAGAAGGG CAATTACAAG GACTCACAGA TTCAATCTCT
TTTACCTCCA CACAGGTAGA GGAGGAGCAG GAAGCTTTTG AGACTTTGCA GGACCAGCTG
GAAGGCTTGC AGGATATGGT GGAAGAAAAG AAAGAAGTCT TCAACCAGAA AAAACTGTCC
CTGGAAAACC AGCGTCGCGA TCAGCAACAA TGGCAACGCC AGCAGTTTGA GGCTGAAAAG
AAAGTAGCGG TGGCAGATAC TTCCGTGCAA AACCTCCAGC GCAGCATTCA GCAGTTGCAG
GAAGAAAAAG CCGGACGTCT GCAACAGATC ACCCAACTGG AAGAAGAGAA GGTGATATTG
CACGAAACCC TGCAGGATCA GAAAGCCGAT CTGGAAGATA TGATCGCTTT CCAGGAAGAA
ACGAAAGGAA AAATACTGGC GACCCAGGGA GAGATAGAAG GGCTGCGTGA CAGACTCGTG
GACGAGAACC GTACCCTGGA CCAGAAGAAG AACGAATATG ACCTCCTAAA ATCGCTCGTG
GACAGCCTTG AAGGTTATCC AGAGAGTATC AAATTCCTGA AAAAGAATAC GGAGTGGAAC
AATGCGGCTC CTATCCTCAG TGATATCTTT TTCTGTAAGG AAGAATATCG TACCTGCGTA
GAAAACCTGC TTGAACCTTA TCTCAACTAC TATGTTGTAA ATAACGCGGC AGAAGCTATT
CAGGCAATCC GTTTGCTCGA TACCAACAAA AAGGGTAAAG CCAACTTCTT TATTCTCGAT
CAGTTCCATC AGCAGAACGG TCATCCGGCT GCGCCTCCGG GTTCCATTCC GGCGCTTGAA
GTCGTAGAAC TGGAAGAACG TTATAAAGGA TTGGGGAATT ATCTGCTTGG GAAAGTATTC
ATTGCAGATG ATATCAGCAT CTTGGAGTTC GACCAGCTGG CAGACCAGGA TGTACTCGTC
ATTGAAAAGA GTGGCAGAAT GAATCGTGGT CGGTACAGTT TTAGCGGTGG ATCCGTCGGA
TTATTCGAAG GAAAGAAACT GGGCCGTGCC AAAAACCTGG AGAAACTGGA TGAAGAGATC
AAAGCGCTGG AAGAAGTAGT TGCTTCCCTG CGTCATCAGA TCCAGGAGAA ACACAACCAG
GTACTCGGAT ATAACACACA GTTGAACGAG AATAAGATCA ATGCTGCCCG CGAGAAGATC
AACCAGTTAA ATAATCAGGT GTTCGGATTG CAGAACCGTA TTGAAAACTT CCGTCAACTT
GTTGAATCAG GGGACAAGCG ACTGCTGGAA ATGCAGGATT CTCTTGAGGC AAACCAGGAC
AGTATTAAAG GTGTAAGGGA AGAACTGGAA GAGCTGAACG AAAAGGTATT CGCTTTGCAG
GATAGTATTG TGGCAGCGGA AAAAGCAGCC GCCGACGCAG AGCAACAGTT TAACCAGGCG
AATGTGCAGT TCAATAATCA GAACCTGCAA CATACCCGTC AGCAGAGTAA AGTACAGGCT
TTGAGGCAGG AACTGGATTT TAAACGCAAG CAATTGTCTG ATCTGCATAC CCAGATCACC
AGTAATAAGT CCCAGCTGGA AGACGCTGTA GCCAATATCG CTGCAGCAGA AGAAAAGCTG
GGAACAGCGG AAGATGGTCT GATTGACCTG TTCCGCAAAA AGGAAGAAGA AGAGAAAGAG
CTGAACGAAA AGGACCAGGA ATATTACAAC TTCCGTAACC AGTTGCAGGA AAAAGAAACG
ACACTCCGCG CACGTCAACG TGCAAAAGAA CAGCTGGAGC AGTCGCTGAC AGTGATTAAG
GATAAGGTGA ATGAGCTTAA ATTGCAACTG GCATCCATGA AGGAAAGGTT GAGCGTAGAG
TTTAAAGTGA ATCTGGATGA GATTATCGAT GAACAGCGTA GTTCTGCTTT ACCGGTAGAT
GAACTGCAGG GTAGTGCCGA AAGACTCAAG AAGCGACTGG AGAACATGGG TGAGATCAAC
CCGACAGCTA TCGAGGCTTA CCAGGAAATG AAGAAACGTT ACGAGTTCAT TCTGGAACAA
AAGACGGATC TGGTAACTGC GAAAGAGTCC CTGATGGCAA CGATCCAGGA AGTAGAAGCG
ACAGCTAACC AAAAATTCCT CGATACGTTC AACCAGGTAA AGGAAAACTT CGTACGTGTA
TTCAAGGCAT TGTTCACCGA AGAAGACCAG TGTGATATGA TATTGAATGA TCCCGAGAAC
CTGGCAGATA CAGGTATCGA GATTATTGCC AAACCTAAGG GTAAACGTCC GGCTGCCATT
ACACAGCTGA GTGGAGGAGA AAAGACACTG ACAGCTACAG CACTGCTGTT TGCTATTTAC
CTGATCAAAC CGGCGCCATT CTGTATCCTC GATGAGGTGG ATGCTCCGCT GGACGATGCC
AACGTAGGTA AATTCACAAA CATGATCCGT AAGTTCTCTG ACAATTCCCA GTTCATCATT
GTAACGCATA ACAAGCAGAC AATGGCAGCT GTGGATGTGA TCTACGGGGT AACCATGCAG
GAACCAGGCG TAAGCAAACT GGTACCTGTG GATTTCAGAA GTCTTAACTA A
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| Protein sequence | MRLKTLEIKG FKSFADKTVL HFDEGVTGVI GPNGCGKSNI IDSIRWVIGE HKISNLRSEN
QSGLVFNGSK TRSASGMAEV SLTFENTRNV LPTEFTTVTI TRKFYKNGDS EYRLNDVACR
LKDIHNLFMD TGVSTDSYAI IELGMVDDII KDKENSRRRM LEQAAGISIY KTRKKEAKSK
LEATEGDLNR IEDLLFEINN NLKTLEAQAR KAERFYEVKK EYREVSIELA KAALEGFNVT
FKELTDEQQA ESDKKLALET EITAAEASVE EDKLHFVAKE RELQVLQKSF NELVSTIRTK
ENDKNLASQQ LTYLKERERN ISQFLSNAEG QLQGLTDSIS FTSTQVEEEQ EAFETLQDQL
EGLQDMVEEK KEVFNQKKLS LENQRRDQQQ WQRQQFEAEK KVAVADTSVQ NLQRSIQQLQ
EEKAGRLQQI TQLEEEKVIL HETLQDQKAD LEDMIAFQEE TKGKILATQG EIEGLRDRLV
DENRTLDQKK NEYDLLKSLV DSLEGYPESI KFLKKNTEWN NAAPILSDIF FCKEEYRTCV
ENLLEPYLNY YVVNNAAEAI QAIRLLDTNK KGKANFFILD QFHQQNGHPA APPGSIPALE
VVELEERYKG LGNYLLGKVF IADDISILEF DQLADQDVLV IEKSGRMNRG RYSFSGGSVG
LFEGKKLGRA KNLEKLDEEI KALEEVVASL RHQIQEKHNQ VLGYNTQLNE NKINAAREKI
NQLNNQVFGL QNRIENFRQL VESGDKRLLE MQDSLEANQD SIKGVREELE ELNEKVFALQ
DSIVAAEKAA ADAEQQFNQA NVQFNNQNLQ HTRQQSKVQA LRQELDFKRK QLSDLHTQIT
SNKSQLEDAV ANIAAAEEKL GTAEDGLIDL FRKKEEEEKE LNEKDQEYYN FRNQLQEKET
TLRARQRAKE QLEQSLTVIK DKVNELKLQL ASMKERLSVE FKVNLDEIID EQRSSALPVD
ELQGSAERLK KRLENMGEIN PTAIEAYQEM KKRYEFILEQ KTDLVTAKES LMATIQEVEA
TANQKFLDTF NQVKENFVRV FKALFTEEDQ CDMILNDPEN LADTGIEIIA KPKGKRPAAI
TQLSGGEKTL TATALLFAIY LIKPAPFCIL DEVDAPLDDA NVGKFTNMIR KFSDNSQFII
VTHNKQTMAA VDVIYGVTMQ EPGVSKLVPV DFRSLN
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