| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4716 |
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| Symbol | |
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| ID | 8360892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5880480 |
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| End bp | 5882759 |
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| Gene Length | 2280 bp |
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| Protein Length | 759 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644966869 |
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| Product | membrane-bound dehydrogenase domain protein |
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| Protein accession | YP_003124354 |
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| Protein GI | 256423701 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | [TIGR02604] putative membrane-bound dehydrogenase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0863725 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0139154 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTACA GGTTTTATCT TATTGGACTA AGTCTATGGT TAGCAGCGTG TAATAGTGGC
GGCGACAAAA AGACTGGCTC TTCCTCCGAC TCACTGACTA TCAGGGAAAA ATACGCAACA
TCTCCCGTAT CAGATGCAAA AACAGCAATC TCGCAAATGG CCGTCGAAAA AGGGCTGGAG
GTGCAGCTGG TAGCTGCAGA GCCGCTGGTA ACCGTACCTG TTGCCATGAC CTTCGACGAA
AAAGGACGTA TGTGGGTAGT AGAAATGACC GGTTATATGC CTGACACAGT GGGTACCGGT
GAAGATATTC CTAACGGTAA AATAGTGATA CTGGAAGATA CCAACCAGGA TGGGGTGGCT
GATAAACGCA CGGTATTTAT AGATTCTCTT GTGTTGCCAA GAGCCATCTG CCTGGTGGAG
AACGGGATAC TGATCGCTGA ACCGCCTAAA TTGTCCTTTA TCGAAATTAA CAATGACAAA
CCTGGCAAAC GAACCCTGGT AGATGATAAA TATACAGAAG GGGGAAATGT GGAGCATCAG
CCCAACGGAC TGTTGCGTGC TATGGACAAC TGGATCTACA ACGCGAAATC AGATAAGCGC
TACCGTAAGG TGGGGAATAA ATGGGTAAAG GAGCTGACGC ATTTCCGTGG ACAGTGGGGT
ATTTCTCAGG ATAATTACGG CCGCCTGTTC TATAATAATA ACTCGGAGAA CGTACTGGGA
GATTATTTCC CTGCGGGTCT GGGGGCACAT AACCCGCAAC AGAAAAATGT ATCCGGTTAT
GACGAGAAGA TCGTGGCGGA CAACCGTGTA TACCCGGCAA GGGCTACTAC AGGGGTAAAC
CGTGGTTATA TGAAAGGTAC CCTGAATGAT AGTCTGCGCC TGGTAAATAT GACAGCGGCT
TGTAGTCCGC TGGTATACAG AGGCGCTTTA CTCGGCAAAG CATACGATAA TAATATATTC
GTGGCCGAAC CTTCCGGTAA CCTGATCAAG CGCAACATCA TCAAAGACAG CGGTTACATC
GTAAAAGGAC AACAGGCCTA TGCACACCAG GAATTCCTGA CCAGTACCGA CGAACGTTTC
AGACCGGTAA GCCTGTATGA TGGTCCGGAC GGCTCATTGT ATGTACTCGA TATGTACAGG
GGGATCATCC AGCATAAGAC TTACCTCACG CCTTACTTAA AGAACGAGAT TAAAAGCCGT
AACCTGACAA ATCCCTTGAA CTGCGGACGT ATCTACCGGA TCGTTCCGGC AGGCACACAT
CCCAGGGCCA CGATTATTGA AAATGATCCA GCCCATCTGC TGGCTTTATT AAGTAACCCT
AATGGCTGGT TAAGAGATAA GGCGCAACAG ATGATCATCG ACCATCATTA TACCACACTG
GTCCCTGCTT TAAGAGCATT GTTACAGCAG AAAGACAGTC TGTATACACA GGCACATGCC
CTTTGGACAC TGGAAGGTCT GGGCGCTTTG CAAATCACAG ATGTGATGGT TTTACTGCAC
CAGGCCAACC CATATGCGCA GGTACAGGGA CTGGCGGCTT TGCCCGCTGT GATCAATGCG
GCTAATGGTA AAGCAGTGTT AAGTGAACTG GCGCTTATGC AGAAGAATGT GTTCCTGGCG
CCTTACGTGG CATTATTACT GCCGGCACTG CCTACCCAGT TACATACGGA AGTGGAGCAA
CTGAAAATGC AGCTCGTGGA AGCGTATGCC AACGATCCCT ATGTGGCGGA TGCGGTGATC
AATAGTATGG CCGGAAAAGA GATTGAGTTA CAGCAACGGC TGAAGAACTG GAACCCCGAC
ACAACACTGG TGCTGGCTAA ACGCCTGAAA AGGGTGATAA AGGATATCGA AAACCACCGG
AAGGCCAGTA TGGATGAAAG TTTACAAAAG ACTTACCCAA GAGGCGCTGT TCTGTTCAAA
ACAGTTTGTC AGACCTGCCA TGGTGCAGAT GGTGATGGTA TTCAATCTCT TGCGCCGCCA
TTGAACCAGT CGGAGATTGT AACCGGCGAT AAACATAAAC TGGCAGCGAT TGTGTTGTTC
GGACTGACCG GACCTGTAAC GGTAGCGGGT AAACAATATA AAGCGCCTGA GATCAGTGGT
GATATGCCGG GTATTGGCAG CAATGACGAG TTTTCGGATA AAGACATTGC GGAAGTACTG
AGTTATATCC GTGGCGCCTG GAGCAACCGG GCGGCTAAAG TGGTAGAGAA AGATATCCAG
GAGGTAAGGA AACAATACAA GGGCAGACAG AAGTCATTTA CCATCGGTGA ACTGAAATAA
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| Protein sequence | MRYRFYLIGL SLWLAACNSG GDKKTGSSSD SLTIREKYAT SPVSDAKTAI SQMAVEKGLE
VQLVAAEPLV TVPVAMTFDE KGRMWVVEMT GYMPDTVGTG EDIPNGKIVI LEDTNQDGVA
DKRTVFIDSL VLPRAICLVE NGILIAEPPK LSFIEINNDK PGKRTLVDDK YTEGGNVEHQ
PNGLLRAMDN WIYNAKSDKR YRKVGNKWVK ELTHFRGQWG ISQDNYGRLF YNNNSENVLG
DYFPAGLGAH NPQQKNVSGY DEKIVADNRV YPARATTGVN RGYMKGTLND SLRLVNMTAA
CSPLVYRGAL LGKAYDNNIF VAEPSGNLIK RNIIKDSGYI VKGQQAYAHQ EFLTSTDERF
RPVSLYDGPD GSLYVLDMYR GIIQHKTYLT PYLKNEIKSR NLTNPLNCGR IYRIVPAGTH
PRATIIENDP AHLLALLSNP NGWLRDKAQQ MIIDHHYTTL VPALRALLQQ KDSLYTQAHA
LWTLEGLGAL QITDVMVLLH QANPYAQVQG LAALPAVINA ANGKAVLSEL ALMQKNVFLA
PYVALLLPAL PTQLHTEVEQ LKMQLVEAYA NDPYVADAVI NSMAGKEIEL QQRLKNWNPD
TTLVLAKRLK RVIKDIENHR KASMDESLQK TYPRGAVLFK TVCQTCHGAD GDGIQSLAPP
LNQSEIVTGD KHKLAAIVLF GLTGPVTVAG KQYKAPEISG DMPGIGSNDE FSDKDIAEVL
SYIRGAWSNR AAKVVEKDIQ EVRKQYKGRQ KSFTIGELK
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