| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4713 |
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| Symbol | |
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| ID | 8360889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5876724 |
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| End bp | 5877905 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644966866 |
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| Product | Radical SAM domain protein |
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| Protein accession | YP_003124351 |
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| Protein GI | 256423698 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
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| TIGRFAM ID | [TIGR00423] radical SAM domain protein, CofH subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0317853 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0266117 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACCA GAAATGACCA TCCGGCAGTA GAATTGTTAC TGCAGGATAC AAGATTGGAC
AAAGGGTTGA AAACCATCGT AGAAAAGGTA ATGTCAGCAG AAAGGCTGAC GACGGAAGAC
GGTCTTCTTT TATTTGAAAA AGGAGAACTT GGTTTCCTGG GCGCCCTTGC CAATGCTGTC
AGAGTGCGTC TGCACGGTGA CAAAACCTAT TTCAATCGTA ACTTTCACAT TGAACCAACC
AACGTCTGCA TCTTTACCTG CAGATTCTGT TCCTACTCCA AGCTGTATAA AAACCGTGAG
GAAGGTTGGG AACTGAGCAT CGATCAGATG CTGGATATTG TGAAAAAATA TGACGGTCAA
CCTGTTACAG AAGTACACAT CGTGGGTGGC GTACATCCAA AGATGAACCT CGACTTCTTC
GTTGAGCTGC TGCAGAAAAT AAGGGCACAC CGTCCTGACC TGCACCTTAA AGGCTTTACT
GCCGTGGAAC TGGATTACAT GTTCCGCAAG GCGAAAGTAA GTGTAGAGGA AGGTATGCGC
ATCCTGCATG ATGCTGGTCT CCAGTCCATG CCGGGCGGCG GAGCTGAAAT ATTCCATTCG
GATATCCGTG CACAGATCTG CCATGATAAA GTAGACGCTG AAGGTTGGTT ACACATCCAT
AAAACGGCGC ACCTGCTGGG TATGCATACC AATGCCACCA TGCTGTACGG TCACGTAGAG
CAGTTCTGGC ACCGTGTAGA CCACATGGAA CAGCTCCGTA AGCTCCAGGA TCAGACCAGA
GGTTTCAATA CCTTTATTCC GCTGAAATTC CGCAATAAGG ACAATGAAAT GGCCCATGTT
GCAGAAACAT CTGTAGTGGA AGATCTGAGA CTGTATGCGA TCGCCCGTTT GTATATGGAC
AACTTCCCCC ACCTGAAAGC CTACTGGCCG ATGCTGGGTA GAAATACCGC TCAATTGACC
CTGTCCTTTG GTGTAAATGA CCTGGATGGT ACCATCGATG ATACCACCAA AATCTACTCT
ATGGCAGGTG CAGAAGAACA GAATCCATCT ATGAATACCG CTCAACTGGC CATGCTGATC
AAACAGGCAG GCAGAAGACC GGTAGAAAGA GATACCGTTT ATAACGAGAT CAAGGACTAC
ACCGATGTGG TGTTCTCAGA AGAGGAATTG ATGGCACGTT AA
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| Protein sequence | MTTRNDHPAV ELLLQDTRLD KGLKTIVEKV MSAERLTTED GLLLFEKGEL GFLGALANAV
RVRLHGDKTY FNRNFHIEPT NVCIFTCRFC SYSKLYKNRE EGWELSIDQM LDIVKKYDGQ
PVTEVHIVGG VHPKMNLDFF VELLQKIRAH RPDLHLKGFT AVELDYMFRK AKVSVEEGMR
ILHDAGLQSM PGGGAEIFHS DIRAQICHDK VDAEGWLHIH KTAHLLGMHT NATMLYGHVE
QFWHRVDHME QLRKLQDQTR GFNTFIPLKF RNKDNEMAHV AETSVVEDLR LYAIARLYMD
NFPHLKAYWP MLGRNTAQLT LSFGVNDLDG TIDDTTKIYS MAGAEEQNPS MNTAQLAMLI
KQAGRRPVER DTVYNEIKDY TDVVFSEEEL MAR
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