Gene Cpin_4710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4710 
Symbol 
ID8360886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5870725 
End bp5871042 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content43% 
IMG OID644966863 
Productthioredoxin 
Protein accessionYP_003124348 
Protein GI256423695 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID[TIGR01068] thioredoxin 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.015363 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0508397 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTAG AATTCACAGA TTCAAACTTC CAGACAGAAG TGTTGGACTC CGATAAATTG 
AGTGTGATAG ATTTCTGGGC AGAATGGTGT GGTCCTTGTC GCGCTATCGG TCCGGTTATC
GAAGACTTGT CTAAAGACTA TGCGGGTAAG GTTAACGTGG GTAAAGTAAA CGTGGACCAG
AATCCTCAGT TGTCTATCAA CTACGGTATC ACAAGCATCC CTGCTATCCT TTTCATTAAA
AATGGTCAGG TAGTTGACAA ACAGGTAGGT GCTGCTCCAA GAGCCATTCT GGAAAAGAAA
ATTCAGACTA ACCTCTAG
 
Protein sequence
MALEFTDSNF QTEVLDSDKL SVIDFWAEWC GPCRAIGPVI EDLSKDYAGK VNVGKVNVDQ 
NPQLSINYGI TSIPAILFIK NGQVVDKQVG AAPRAILEKK IQTNL