Gene Cpin_4706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4706 
Symbol 
ID8360882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand- 
Start bp5863712 
End bp5864827 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content47% 
IMG OID644966859 
ProductUDP-N-acetylglucosamine 2-epimerase 
Protein accessionYP_003124344 
Protein GI256423691 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0381] UDP-N-acetylglucosamine 2-epimerase 
TIGRFAM ID[TIGR00236] UDP-N-acetylglucosamine 2-epimerase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.213121 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGAAGA TATTTTTCCT CTTTGGTACC AGACCTGAAG CCATTAAAAT GATACCGCTG 
ATCAAAGCAT GTGAACAGCA ACCCGATAAA TGGCAGCCAT ATATATGTGT GACCGGTCAG 
CATAGACAGA TGCTGGCACA GGTACTGGAC TTTTTTGGTG TCACTCCGCA TGAGGACCTG 
GCCCTGATGA AACCTGGACA AACCCTTTTC GATATCACCG CAGATGGTCT GAAACGACTC 
GATGAAGTGC TGGAAAGAGA AAAACCAGAC GTACTTGTGG TTCAGGGTGA TACTACCTCC 
GCTTTCACCG GCGCATTAGC CGCCTACTAT AAAAAGATCA AAATAGCGCA TATCGAAGCC 
GGACTGCGCA GCGGTAATAA ATATTCTCCC TTCCCGGAAG AAATGAACCG TAAGATGACC 
GGCAACCTGG CTGATTTTCA TTTTGCACCT ACTGTTAATT CGCAGCAAAA CCTGCACGCA 
GAAAATATAC ATGAACATGT GTACGTGACT GGCAACACCG TGATCGATGC ATTGCTCATG 
ACAGCAGATA TCATCAAAGA TGCCGCTGCC TACAAAGAAT ATTTCAGCTT CCTTGATCCT 
TCTAAAAAAA CGATCCTGGT AACCGGCCAC CGTCGCGAGA GCTTCGGACA ACCATTCGAA 
GAGATCTGTA TGGCGGTGCG TGATATCGCT ATCCGTTACG AAGGAAAAGT ACAGATCGTT 
TATCCTGTAC ACCTGAATCC ACAGGTGCAG GAACCTGTAC AGCGTCTGCT GACCGGCGTA 
CCGGGCGTAC ACCTGATTGA ACCGCTGGAT TATCCATACC TGGTATGGCT TATGAAACAG 
AGTTACCTCG TACTGACCGA CTCCGGTGGT ATTCAGGAAG AAGCGCCTGC ATTGGGTAAA 
CCCGTACTGG TTATGCGCGA TGTAACAGAA CGTACAGAAG GTATTGACGC AGGTACGGCC 
CGCTTAGTAG GTACCAGCCG CCATGCAATC GTTGAGAACT GCTTTGCACT GATGGACGAT 
GAACAATTGT ATCAGCAGAT GGCACAGGCC GTAAACCCTT ACGGAGACGG TACCAGCTCA 
ACACAGATCA TTGATATTTT ACACAAAGTA TTATAA
 
Protein sequence
MKKIFFLFGT RPEAIKMIPL IKACEQQPDK WQPYICVTGQ HRQMLAQVLD FFGVTPHEDL 
ALMKPGQTLF DITADGLKRL DEVLEREKPD VLVVQGDTTS AFTGALAAYY KKIKIAHIEA 
GLRSGNKYSP FPEEMNRKMT GNLADFHFAP TVNSQQNLHA ENIHEHVYVT GNTVIDALLM 
TADIIKDAAA YKEYFSFLDP SKKTILVTGH RRESFGQPFE EICMAVRDIA IRYEGKVQIV 
YPVHLNPQVQ EPVQRLLTGV PGVHLIEPLD YPYLVWLMKQ SYLVLTDSGG IQEEAPALGK 
PVLVMRDVTE RTEGIDAGTA RLVGTSRHAI VENCFALMDD EQLYQQMAQA VNPYGDGTSS 
TQIIDILHKV L