Gene Cpin_4696 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4696 
Symbol 
ID8360872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5855100 
End bp5855549 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content46% 
IMG OID644966849 
ProductNUDIX hydrolase 
Protein accessionYP_003124334 
Protein GI256423681 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID[TIGR00586] mutator mutT protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.67554 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0300067 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGGTT TCAATGTACG CGTATATGGT ATAATGTTCA ATGAGCAGAA ACAAGTGCTC 
GTGACAGATG AATTCATTAA AGGAGGATAC TTTACGAAGT TTCCCGGCGG CGGATTGGAA
TTCGGGGAAG GCACTTTACA GTGTGTGGTA AGGGAGTTTC AGGAAGAACT GGGACTGGAT
GTAGAAGTAG TGGAACATAT CTATACCACT GATTTCTTTC AGATATCTGC CTTTGGCGAC
GGTTCACAGA TCATCTCTAT CTATTACCTG GTGAAACCAT TGGCGCCGTT TAATTTCCCC
CTGCTGGACA AACCTTTCGG ATTTGACGTA CCGGAAGGCG CACTGGAAGT AGAAGGCGCC
AGGTGGATCA ACTGGGAAGA ATTCTCCGCC GAAGCAGTCA CCCTTCCCAT TGATAAAGTA
GTGGCAGATC TGGTAAAAGT CCGTTACTGA
 
Protein sequence
MQGFNVRVYG IMFNEQKQVL VTDEFIKGGY FTKFPGGGLE FGEGTLQCVV REFQEELGLD 
VEVVEHIYTT DFFQISAFGD GSQIISIYYL VKPLAPFNFP LLDKPFGFDV PEGALEVEGA
RWINWEEFSA EAVTLPIDKV VADLVKVRY