| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4695 |
|---|
| Symbol | |
|---|
| ID | 8360871 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 5854139 |
|---|
| End bp | 5855077 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644966848 |
|---|
| Product | Mg2 transporter protein CorA family protein |
|---|
| Protein accession | YP_003124333 |
|---|
| Protein GI | 256423680 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0598] Mg2+ and Co2+ transporters |
|---|
| TIGRFAM ID | [TIGR00383] magnesium Mg(2+) and cobalt Co(2+) transport protein (corA) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.551554 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.0119033 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCAAT ATTTCAAAAA TATAGACTCG CGCACGGTAG AAATTTCGGG ACCTGAGAAT
GGGGCCTGGG TAAATATTAC CCCTCCCCTG AAACAGGCAG AATTTGCCCA GCTCTCCGAA
GAGCTGGACA TTCCGCTGGA CTTCCTGACC GACTCGCTCG ATATAGACGA GAAATCCCGC
TATGAGCTGG AAGATAATGT GAAACTGATC GTCATCAAAA CTCCGACGGA AAACAATTCC
ATCAATGAGA GCGATGCGTA TTATATCACG ATCCCGATTG TAATCATCCT CACGCATAAT
CAGATCCTGA CGGTTAACTC ATTCGATAAC GCGGCTATTA ACCGCTTCCT GAATACCTTC
CATAACCGTC ATCCCGAGAA AAGAAATATG ATGGTGCTGA AGATCTTCGA AAAGGTAACC
ATGAACTTCC TGGATTACCT TAAAGAGATC AATCAGCGCA GAAATATACT GGAACAAAAG
CTGTATGACA GTAACCGTAA CGAGGAACTG CTGTACATCA TGCGTATCCA GAAAAGCCTG
GTATACTTCC TGACCGCATT GCGCAGCAAT GAACTGCTGC TCATGAAACT GGAACGTACT
AACTTCCTGG GCCTGAACGA AGACGAAAAG GAATTCCTGC ATGACCTGAT CGTAGATACC
TCTCAGGCGC TTGAAATGGC GAACGTCTAC ACCAACATAC TTAGCAGTTC GATGGATGCC
TTTGCCAGCA TCATTTCCAA TAACCTGAAC CTGGTAATGA AACGCCTCAC GTCCATTACC
ATCGTACTCA CCTTCCCGGT GCTTGTAGCC AGTATCTATG GTATGAACGT GGAAATACCT
TTTGCGCATT CAACACATGC GTTCTATATT CCCGTCATAC TGTCGATCGT GATCTCTGTG
ATCATGAGCT GGTACTTTAT GAAGAAGAAA TGGTTCTGA
|
|---|
| Protein sequence | MIQYFKNIDS RTVEISGPEN GAWVNITPPL KQAEFAQLSE ELDIPLDFLT DSLDIDEKSR
YELEDNVKLI VIKTPTENNS INESDAYYIT IPIVIILTHN QILTVNSFDN AAINRFLNTF
HNRHPEKRNM MVLKIFEKVT MNFLDYLKEI NQRRNILEQK LYDSNRNEEL LYIMRIQKSL
VYFLTALRSN ELLLMKLERT NFLGLNEDEK EFLHDLIVDT SQALEMANVY TNILSSSMDA
FASIISNNLN LVMKRLTSIT IVLTFPVLVA SIYGMNVEIP FAHSTHAFYI PVILSIVISV
IMSWYFMKKK WF
|
|---|
| |