| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4689 |
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| Symbol | |
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| ID | 8360863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5848363 |
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| End bp | 5849913 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644966840 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_003124327 |
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| Protein GI | 256423674 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.200154 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00098784 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCAACAG TACCCCTTTC CAGTGCCGCC GGCAGATGGA TCATGATCTC CGCAATTATG
GCTTCCGCTA TGGCTTTTAT TGACGGCACC GCGCTCAATG TCGTATTACC CTCTATTCAG
AAAAGTATGC ACGCCTCCGG TACAGATCTC TTCTGGATCC TGAATGCTTA TTTACTGATG
CTGGCAGCAC TGATGTTGAT CGGAGGTTCG CTGGGTGACA GACTGGGCCG CAAAAGAGTC
TTTATTGCCG GTATCCTGAT CTTTATCGCC GGTTCTGCTG CCTGTGGTAT CGCTGGTGAT
GTTACCTTAC TGATATTGTT CAGAATGTTA CAGGGTATCG GAGGCGCCCT GATGATACCC
GGTAGCCTGT CGCTCATATC TTCTTCCATA CATGAAAAGG AGCGGGGTAA GGCAATCGGT
ACCTGGTCGG CCTTTACGAC TGTAGTGACT ATTGGCGGTC CCGTATTAGG CGGCGCACTC
GCAGATGCCG GCTACTGGCG TTATATCTTT TTTATCAATG TACCCATCGG TATTGTCGCT
GTGCTGATCT TATGGCGAAA GGTAAAAGAG AGCGTTGATG ATACACAGGA TAAGACACTC
GATTTTGCAG GCGCATTTTC AATTGCCGCC GGACTGGCAG CAGTGACCTT TGGTTTTCTG
CGCATTCCCG ATACCGGTTT CAATAACTGG CAGGTCCTGC TTTCATTGGG CCTGGGTGTA
TTATTGCTGA TCATCTTCGT TATTATTGAA CGCAGGAGTC CACATCCCAT GATGCCTTTA
TCCCTGTTTA AGAATATGAC CTTCTCAGGA GCCAATCTGC TGACTTTCTT CCTGTATGCA
GGGTTAAGCG CAGGCATGTT GTTCCTCTCA CTGAACCTGG TTCAGGTACA GGGTTATGAT
CAGTTGCAAT CCGGACTGAC CTTTTTACCC TTCACCATTC TGATGGTACT GGTAGCCCGT
TTTGCAGGTA CGCTGGCAGA CAGGTATGGT CCGCGTTTGC TGCTGACCAT CGGACCAGCT
ATTGCCGGCG CGGGATTACT GATCTTATCC TTTATCAAAC AAACCCCTGG ACCTGGGGCC
TATTTTACCA CCTTCTTTCC AGGGATTGTC GTCTTTGGTT TAGGTATGTC TTTTACCGTA
GCGCCGTTGA CAGCAACCGT GATGGGCGCT GTGAGTGATC ATTATTCAGG CACGGCATCA
GGTATCAACA ATGCATTGTC CCGTATTGCA GGCGTCTTTG CCAATGCTAT TTTCGGTGCG
ATGGCCGTAT TGTTCTTTTC CGGCTTTCTA CAAAGAGAAC TACCGGCTTT ATCCTTGAAA
GAACAGGACA GGAAGGAAGT GGTACAACAG GCGGCTGAAC TGGGAAATGC CCGCCCGCCT
GCTGTATTAA ATGAAGCAGA TAGCAAAAAA GTAAGGCAAC TGTATCACGA TAGTTTTATT
GACGCTTATG GTAAGATCAT GCGCATCTCC GGTGTGCTGG GCTTTCTGGG TGCATTGATG
GCGGTATTGT TTGTAAGGAA CAGTGCCGTC ACAACAACAA AACAGGACTA A
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| Protein sequence | MATVPLSSAA GRWIMISAIM ASAMAFIDGT ALNVVLPSIQ KSMHASGTDL FWILNAYLLM
LAALMLIGGS LGDRLGRKRV FIAGILIFIA GSAACGIAGD VTLLILFRML QGIGGALMIP
GSLSLISSSI HEKERGKAIG TWSAFTTVVT IGGPVLGGAL ADAGYWRYIF FINVPIGIVA
VLILWRKVKE SVDDTQDKTL DFAGAFSIAA GLAAVTFGFL RIPDTGFNNW QVLLSLGLGV
LLLIIFVIIE RRSPHPMMPL SLFKNMTFSG ANLLTFFLYA GLSAGMLFLS LNLVQVQGYD
QLQSGLTFLP FTILMVLVAR FAGTLADRYG PRLLLTIGPA IAGAGLLILS FIKQTPGPGA
YFTTFFPGIV VFGLGMSFTV APLTATVMGA VSDHYSGTAS GINNALSRIA GVFANAIFGA
MAVLFFSGFL QRELPALSLK EQDRKEVVQQ AAELGNARPP AVLNEADSKK VRQLYHDSFI
DAYGKIMRIS GVLGFLGALM AVLFVRNSAV TTTKQD
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