Gene Cpin_4687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4687 
Symbol 
ID8360861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5844748 
End bp5845293 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content45% 
IMG OID644966838 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_003124325 
Protein GI256423672 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.535947 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.00121502 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTTTGACA AATTTCCTAC GATACGAACA CCGCATCTGG AACTGATTCA GATTACAGAG 
GCGCATGCGG AAGATCTGTA CAAACTATTC GGCGACAGCA ATGTCACCCG CTTCTATAAT
CTCACACCAC TGGAATGCCC GGATGACGCT CACCGGCTGA TCGATCATTT CCGGAAGCGT
TTCGAATCCA AAGCCGCTAT CCGCTGGGGT ATTCGTTTGA ACGACCGGAA GGATATCATC
GGTACTGTAG GCTTTAACAA CTTCACACCA AAACACCGCG CCAATATCGG TTATGACCTG
CAATATGCTT ACTGGAACAG GGGGATCTGT ACAGAAGCCT TACATGCTAT CATCAGCTTT
GGCTTTCATG CGCTTAATAT CAATCGTATT GAATCAGAAG TTATGGAAGG AAATGCCTCT
TCTATCCACC TGATGCATAA AATAGGGTTT AAACACGAAG GTACCTTGAG GGATTGGATG
TATTGGAATA ACAGGCATTA TGATATGCTG ATGTTTTCCC TGCTACGCTC CGATCCACAT
CAATGA
 
Protein sequence
MFDKFPTIRT PHLELIQITE AHAEDLYKLF GDSNVTRFYN LTPLECPDDA HRLIDHFRKR 
FESKAAIRWG IRLNDRKDII GTVGFNNFTP KHRANIGYDL QYAYWNRGIC TEALHAIISF
GFHALNINRI ESEVMEGNAS SIHLMHKIGF KHEGTLRDWM YWNNRHYDML MFSLLRSDPH
Q