| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4680 |
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| Symbol | |
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| ID | 8360854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5838617 |
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| End bp | 5839675 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644966831 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_003124318 |
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| Protein GI | 256423665 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.181232 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.000198161 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACGGAC ACCGTAAAGT AGCGCTGATA GCGGGCGCAC AGGGAGTAAT AGGCAGGAAT
CTCGCAGATC ACCTGGATGC AGCAGGGGAT TGGGATATTA TCGGACTTTC CCGCAGGGGT
GGTGAAGCCC AAGGAAATAT CAGGCATATA GCGGTCGATT TACTGGATAA AAAAGATACA
ACTGATAAAC TGGGCGGTCT GACTACTGTG ACGCATATTT TTTATGCCGC CTATGTAGAT
GCGCCAACCT GGGCCGCATT GGTACCACCT AATATGGCGA TGCTGGAAAA CCTGGTCAAT
GTGGCAGAAC CTGTTGCAAA AGGCTTACAG CATATCAGTC TGATGCAGGG ATACAAGGTA
TATGGTGCAC ATCTCGGATC TTTCAAAACA CCGGCCAGAG AGTCTGACGC TGGTCATATG
CCGCCTGAAT TCAATGTAGA TCAGCAGGTA TTCCTGGAAA AGCGACAAGC GGGTAAGTCA
TGGAGCTGGT CCGCTATCCG GCCGTCTGTA GTCGGTGGGT TTGCCCTGGG AAATCCCATG
AACCTGGTGC TGGCTATCGC TATATACGCG TCCATTTCAA AGCAACTGGG ACTGCCTTTG
CGCTTTCCCG GCAAATCAGG GGCTTATGAT AAACTGATAG AGATGACAGA TGCTGGTCTG
CTGGCAAAGG CAACTACCTG GGCCGCAGAG AGTCCCAAGG GCGCGAATGA GGCATTTAAT
ATCAACAATG GGGACTTATT CCGCTGGAAT GAAATGTGGC CGGAAATAGC CCGTTATTTT
GAGCTGGAAG TGGCGCCACC CTTACCAATG ACCCTCAATG TGATCATGGC AGATAAGGCT
GCGCTGTGGC AACAGATACA GGAACAATAC CAGCTGGCCG CTATTCCTTA TGAGCAGTTA
TCATCCTGGG GTTTTGCAGA TTTTGTGTTT TCCTGGGATT ATGACATGTT TGCGGATGGC
AGTAAGGCCC GCAGGGCAGG ATTTCATGAA TACGTCGATA CGAAGGAAAT GTTTTTCCGC
ATCTTTGACG ATTTCAGGCA GCGTCGTATC ATTCCCTGA
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| Protein sequence | MNGHRKVALI AGAQGVIGRN LADHLDAAGD WDIIGLSRRG GEAQGNIRHI AVDLLDKKDT
TDKLGGLTTV THIFYAAYVD APTWAALVPP NMAMLENLVN VAEPVAKGLQ HISLMQGYKV
YGAHLGSFKT PARESDAGHM PPEFNVDQQV FLEKRQAGKS WSWSAIRPSV VGGFALGNPM
NLVLAIAIYA SISKQLGLPL RFPGKSGAYD KLIEMTDAGL LAKATTWAAE SPKGANEAFN
INNGDLFRWN EMWPEIARYF ELEVAPPLPM TLNVIMADKA ALWQQIQEQY QLAAIPYEQL
SSWGFADFVF SWDYDMFADG SKARRAGFHE YVDTKEMFFR IFDDFRQRRI IP
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