| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4679 |
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| Symbol | |
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| ID | 8360853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5837711 |
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| End bp | 5838592 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644966830 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003124317 |
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| Protein GI | 256423664 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.603206 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.000201737 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATGTCA TCAATCTTCC TCAGGATCTC AATCCGGCGC AATACCGCGC GGAAGACCGG
ATACTGATCC GGCCATATAC TTCTCCCTGC AATACTAAAA AGAATCGTGT GATCCTGCAC
AGGAACATGA TTAATTTACT GATAGAAGGA CGTAAGACGG TTATTTACGG CGGACAAACA
ACCACCGTCA ATGACAATGC GATCTTATTC CTGGCAGCCG GTAGTTGTCT GACGACAAAC
GTAAAATCGG ATAACGGCAA TTTTCAGTCC GTACTCCTGT ATTTCAGCGA TGACGCCCTC
CTGGATTTTT ACATGAAATA CGACCGCCTG GTACAGGCAC AACAGCAGGA TAAGCAATTA
CCGGCTGCTT CATTCATCAC TTTTGAAAAA GATGTTTTTC TCCGGAACTA TATAGAGTCA
GTCAGACATT TATTACAATT GGGACAGCCA TTGCCCCAGG AAATCTGTAT CCTGAAGTTT
GAAGAGCTAT TGCTGTATCT GTTACAGACT GCACCGGAGA CGCTATTACA ACTGAAGGCC
AATGCGACGG GGAGTATGCA GGATTTTGAG ATCAGGAAGG CGGTGGAAGG GAATATCACC
AGACCGGTGA CTGTGGAGGA ACTGGCTTTT CTGTGCAGTA TGTCGCTGTC TACTTTTAAA
CGCAGGTTTA CGAAGATCTA TGGCACTTCT CCGCAGCGCT GGTTACTGGA GCAGAAAATG
CAGGTGGCCG CCCGTTTGCT GCTGGATCAG CAAGCCAAAC CAGGCGATGT ATATGACCAG
GTGGGATATG AAAGTCATTC CAGTTTCACG AAAGCCTTCC GCCAGGTATT TGGTATGACA
CCATCGGCTT ACCAGGAACA AAATATGAAC GTCCAGGCAT AA
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| Protein sequence | MNVINLPQDL NPAQYRAEDR ILIRPYTSPC NTKKNRVILH RNMINLLIEG RKTVIYGGQT
TTVNDNAILF LAAGSCLTTN VKSDNGNFQS VLLYFSDDAL LDFYMKYDRL VQAQQQDKQL
PAASFITFEK DVFLRNYIES VRHLLQLGQP LPQEICILKF EELLLYLLQT APETLLQLKA
NATGSMQDFE IRKAVEGNIT RPVTVEELAF LCSMSLSTFK RRFTKIYGTS PQRWLLEQKM
QVAARLLLDQ QAKPGDVYDQ VGYESHSSFT KAFRQVFGMT PSAYQEQNMN VQA
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