Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4673 |
Symbol | |
ID | 8360847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 5833485 |
End bp | 5833973 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644966824 |
Product | Ankyrin |
Protein accession | YP_003124311 |
Protein GI | 256423658 |
COG category | [R] General function prediction only |
COG ID | [COG0666] FOG: Ankyrin repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.367639 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00000788289 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTGCAA TTGTCAATGA ATTTTTTAAT GCGGCAAGAA CCGGCGACAT CACTTTTTTG CAGGAAAACA TCAGTAAAAT AGAGGATCTG AATGTTCGCG ACAGTCGTGG ATATACACCC CTGATCATTG CCACCTATAA TAACCAGATC GAGGCAGCTG CATTATTGCT CGAAGCAGGT GCAGATGTAA ATGCGGCAGA CTATGGTGGA AACACTTCTC TGATGGGCGT AAGTTTCAAA GGTTATCCGG AAATAGCAAC GTTGCTGATT GGTTATGGCG CTGATCTGAA CTTGCAACAT GGCAATGGCG GTACTGCGTT GATGTTTGCC GCGATGTTTG GAAGGAATGA TATGATAAAG CTATTGCTTG ATTTTGGTGC GGACATCAAT ATCCGGGAGA ATAGAGGGAT GACTGCCGCT GATCTGGCAG CACAACAGGG AAATGCAGCA GGAGTGGAAA TGCTGGAGGC AGCAGGAATT GAAAAGTAG
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Protein sequence | MSAIVNEFFN AARTGDITFL QENISKIEDL NVRDSRGYTP LIIATYNNQI EAAALLLEAG ADVNAADYGG NTSLMGVSFK GYPEIATLLI GYGADLNLQH GNGGTALMFA AMFGRNDMIK LLLDFGADIN IRENRGMTAA DLAAQQGNAA GVEMLEAAGI EK
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