Gene Cpin_4673 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4673 
Symbol 
ID8360847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5833485 
End bp5833973 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content46% 
IMG OID644966824 
ProductAnkyrin 
Protein accessionYP_003124311 
Protein GI256423658 
COG category[R] General function prediction only 
COG ID[COG0666] FOG: Ankyrin repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.367639 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00000788289 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTGCAA TTGTCAATGA ATTTTTTAAT GCGGCAAGAA CCGGCGACAT CACTTTTTTG 
CAGGAAAACA TCAGTAAAAT AGAGGATCTG AATGTTCGCG ACAGTCGTGG ATATACACCC
CTGATCATTG CCACCTATAA TAACCAGATC GAGGCAGCTG CATTATTGCT CGAAGCAGGT
GCAGATGTAA ATGCGGCAGA CTATGGTGGA AACACTTCTC TGATGGGCGT AAGTTTCAAA
GGTTATCCGG AAATAGCAAC GTTGCTGATT GGTTATGGCG CTGATCTGAA CTTGCAACAT
GGCAATGGCG GTACTGCGTT GATGTTTGCC GCGATGTTTG GAAGGAATGA TATGATAAAG
CTATTGCTTG ATTTTGGTGC GGACATCAAT ATCCGGGAGA ATAGAGGGAT GACTGCCGCT
GATCTGGCAG CACAACAGGG AAATGCAGCA GGAGTGGAAA TGCTGGAGGC AGCAGGAATT
GAAAAGTAG
 
Protein sequence
MSAIVNEFFN AARTGDITFL QENISKIEDL NVRDSRGYTP LIIATYNNQI EAAALLLEAG 
ADVNAADYGG NTSLMGVSFK GYPEIATLLI GYGADLNLQH GNGGTALMFA AMFGRNDMIK
LLLDFGADIN IRENRGMTAA DLAAQQGNAA GVEMLEAAGI EK