| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4672 |
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| Symbol | |
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| ID | 8360846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5832106 |
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| End bp | 5833416 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644966823 |
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| Product | oxidoreductase domain protein |
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| Protein accession | YP_003124310 |
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| Protein GI | 256423657 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.377369 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00000419648 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACAACT CAAGAAGACA CTTTATCCGC TCTGCCTCTA CCCTTGTCGC AGGAGCTGGA
TTAGTCGGTG CGTTGCCCTC CGCTCTCCGC GCAGTTGCCC CCAGTGATAA GATCAATGTC
GCCGCTATCG GCATCAACGG AATGGGCTGG TCAGACCTCA CCGCTATTCT CAAAAACCCG
TACGCACAAT GCGTCGCCCT CTGTGATGTT GACAAAAATG TACTCGATAA ACGGGCCGCA
GAACTGGACA AGAAGGGCCA GAAAGTAAAG ACCTATGGCG ACTACCGTAA ATTACTGGAG
GACAAATCCA TCGATGCCGT GATCATCGGT ACGCCCGATC ACTGGCACTG CCTCCAGATG
ACTGACGCCG TATCCGCAGG GAAAGACGTT TACGTCGAAA AGCCCATCGG TAACTCTATT
GCAGAGATTA AAGCCATGCT GTATGCCCAG GAAAACACCA AACGTGTCGT ACAGGTAGGT
CAGTGGCAAC GTAGTCAGCA ACACTTTAAA GACGCCATCG CTTTCGTACA TTCCGGTAAA
CTCGGACAAG TCCGCCTGGT CAAAGCCTGG GCCTATATGG GCTGGATGCA CTCCATTCCA
AAACAACCAG ATGGTAATCC CCCTGCAGGT GTAGATTACG CTGCCTGGCT AGGTCCTGCG
CAAAAGCGCC CTTTTAATCC TAATCGCTTC CATTTCAATT TCCGCTGGTA TTGGGATTAT
GCTGGCGGAC TGATGACCGA CTGGGGCGTA CACCTGCTCG ATTATGCATT GTTAGGCATG
AAGGCACAGC ACCCGCAGTC AGTAATGGCT GCCGGCGGCA AATTCGCTTA TCCTGATGAT
GCGGCTGAAA CACCGGATAC ACTGACAACA GTTTATCAGT TCGACGGCTT CAATATACAA
TGGGAACACG CTATCGGCAT AGACGGCGGT CCTTACGGCC GTGATCACGG TATTGCCTTC
ATCGGCAATA ACGGTACACT GGTACTGGAT CGTGGCGGAT GGGAAGTGAT CCCTGAAAAA
GATAAAATGG AAGCAGTGCC ACGTCAGAAG TCCGTGGACA ATGGCCTGGA CAAACATGCC
ACCAACTTCC TGGAAGTAAT TAAGTCCCGC AAACTGGAAG ACCTGAACAC GCCACTGTCA
GCCGGCGCAC ACGTCGCTAC TATTGCCCAG TTGGGAAATA TCGCTTACAA AACAAGCCAG
AAGCTACACT GGAATGGCGC TACCGGTGGA TTCACTGAAA AAGAGGCCAA CAAATACCTC
ACACCTGAAT ATCACAATGG TTATAAACTG CCTAAGTCAA CCATGAAGTA A
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| Protein sequence | MNNSRRHFIR SASTLVAGAG LVGALPSALR AVAPSDKINV AAIGINGMGW SDLTAILKNP
YAQCVALCDV DKNVLDKRAA ELDKKGQKVK TYGDYRKLLE DKSIDAVIIG TPDHWHCLQM
TDAVSAGKDV YVEKPIGNSI AEIKAMLYAQ ENTKRVVQVG QWQRSQQHFK DAIAFVHSGK
LGQVRLVKAW AYMGWMHSIP KQPDGNPPAG VDYAAWLGPA QKRPFNPNRF HFNFRWYWDY
AGGLMTDWGV HLLDYALLGM KAQHPQSVMA AGGKFAYPDD AAETPDTLTT VYQFDGFNIQ
WEHAIGIDGG PYGRDHGIAF IGNNGTLVLD RGGWEVIPEK DKMEAVPRQK SVDNGLDKHA
TNFLEVIKSR KLEDLNTPLS AGAHVATIAQ LGNIAYKTSQ KLHWNGATGG FTEKEANKYL
TPEYHNGYKL PKSTMK
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