| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4660 |
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| Symbol | |
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| ID | 8360833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5813872 |
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| End bp | 5816556 |
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| Gene Length | 2685 bp |
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| Protein Length | 894 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644966811 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003124299 |
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| Protein GI | 256423646 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0120659 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000000956087 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAATTTAT TCATTCATAT CAATGGCATG CCCTTGCCCG ACGGAGGCGG CAAGGGGTAC
CACAGCCAGA CCTTTAAGTA CCTTTTAGCA ATGAAGTTGT TCCTAGCCAT CTTACTGATT
ACTGTGAATG TATCGGCTAA TGTATACTCC CAGAAGGTAA ACATTTCGGT TACCAATGCC
CCCTTGCGGG ACGTGATGAC ACAGATACGA CAGCAAACGG GGCATTATTT TCTGTTTGCC
ACCTCCCTGC TCAAAGATGC ACACCCCGTA ACTGTAACGC TAAAACAAGC AAGTCTGGAT
GATGCACTAA AAGAAATATT CAAAAACCAA CCATTTACTT ACACTATCCA GGACAATGCG
ATCCTTGTAA ATCCGAAGCC TCAAAACCTC TCTGAAAAAA TAAAGGATTT TTTTTCGGAC
ATCGTTATCC GCGGCAGGGT AACTGATGAA AATGGAGCAC CCCTCCCCGG AGCATCGGTC
AAGGCAAACG GTAAAGTAGC GATAACGAAC AGTGAAGGCA ATTTTGAACT TACCGGGATT
AATGAAAGTT CGACTGTAGA GGTATCTTAT ATCGGTTATC GAACTATCTC AATGGTTGCC
TCAGTTGAAT TCATGGCCAT TAGATTATCT CTAAATTCAT CCGACCTGCA GGAAGTGGTG
ATCAATAAGG GATACTACCA AACCACCAAA GCGCTAAATA CAGGAAACGT AAGTATGGTT
GAGGCGAAAG ACCTAGCTAG AAATCCTGTC TCAAACCCAT TAATTGCATT GCAGGCACAA
GTACCCGGAC TTTTCATCTC TCAAACATCG GGCGTTTCCG GATCGAAAGT TAATGTGAGG
TTGCGTGGCC AGAATAGTCT ACGTTTTGAT GCCAATAACC CATTATATAT CATTGATGGA
GTTCCCTTTC CTGTTATTGT AACGACCTCC GGTGCTGGCG CTGCTGGTGA ACTTAGCCCG
TTTGCAAATC TTGCTTTAAA TGATATCGAA AAAATAGAAG TCTTAAAAGA TGCCGATGCC
ACGGCGATCT ATGGTTCACG AGGTGCAAAC GGCGTTATCC TCATTACCAC TAAAAAAGGT
GTTAACGGAG GCACACGTGT ATCCTTTGAT GTAGGTAACG GAGTTGGCGT AACGTCTAAT
AGAATCCATT TGATGAAGAC AGATCAATAC CTGGCCATGC GCAGGCTTGC TTTGGCAAAT
GATGGCGTTA CAACGCCTGC GGCATCAGAT TATGACCTCA ATGGAAAGTG GGGAGATATA
AACCAGTATA CAGACTGGCA AGACTTACTG ATCGGTGGAA CTGCACATTT TACGAACGCA
CAGACTTCAG TATCCGGGGG CAACGCCAAT ACACAATTTA TTTTTGGCGG TGCTTTCAGA
AGAGAATCAA CGGTCTTTCC GGGGGACTAT CACGACCAAA AGGCTTCAAC ACATTTAAGT
ATTAATCACA AAAGTGATAA TCAGAGGTTT CGTAGCTCTA TTTCCTTCAG TTATTTGAAT
GATAATAACT TGCTGCCTTC AGCTGATTTC ACGACAAACA TCGGACTGTC TCCTAATGCG
CCAATGGTTT ATAATGCCGA TGGTACGTTA AATTGGCAAA ATGGTACCTG GGTCAATCCA
ATATGGCCCA CCACTCAGTC TTCAACAGCG ATTACTGATA ATTTAAACGG ATCAGCAACT
GTAGGTTATG AGATAATAAA TGGATTAACA ATTAACGGTA GGTTTGGATA TACCGATATA
AAAACAAGCA CCTCGTCTAT TAATCCGTTC ACGAATTATA ATCCAGCTGT AGTTATTCAA
CCGACTCAAA GAACAAATTC ATTTAGTGCA GGAAGTGTTA AGACCTGGAT CTTAGAGCCA
TATTTGAATT ACGAGAAGTC GTTGGCCGGT GGAAAAATTG AAGCAGTGCT GGGTGGTACA
TTGCAGCAAA CAGATCAGAA TTTCATTTCA CAGTTTGCGT CCGGCTTTTC TTCCCCTTCA
ATGGTAACCA ACATTGCTGC AGCGACCTCG GTACAGGTTT TCAGCTATAC AGCTTCCCGA
TATCGTTATA ATGCGTTATA TGCCCGCTTG GGCTATAATT ATCAGGACCA ATACTTAATA
AATTTCACAG GTCGACGTGA TGCCAGTAGC AGATTTGGTC CGGGTAAACA GTTTGCCAAT
TTTGGTGCCA TTGGAGCAGC CTGGATATTT AGTAAACAAC AGTTTGTGAC TGAGAAATTA
CCAGTACTTT CCTTTGGAAA GCTTAGAGCA AGTTACGGCC TGACTGGAAA TGATCAGATT
TCAGACTATA AGTTTTTGAG TACATATTCT GCAACAGGAT TTTCTTATCA GGGTACAGGT
GGCATTAGCC CAACTGCCCT TACAAACCCG GATTACGGAT GGGAAACTGT AAAAAAATTG
GAGGCTGGAT TAGATCTAGG ATTTTTTAAA GATCGCATTC TTCCTAATGT AAGCTGGTAT
CAAAACAGAA CAGGTAACCA ACTAGTTGCC TATGCGTTGC CCGGAATTAC TGGTTTTACT
TCAGTACAGG CAAATTTGCC AGCAATACTA CAAAACAGGG GAACAGAATT TGAGTTGACA
ACACAAAATT TTCAGGGTGG ACACTTCAGA TGGACAACCA GTGCAAATTT AAGTATACCT
ACCAATAAAC TGGTCTCAAT CGGTAGCAGC AGCAGAGATG GATGA
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| Protein sequence | MNLFIHINGM PLPDGGGKGY HSQTFKYLLA MKLFLAILLI TVNVSANVYS QKVNISVTNA
PLRDVMTQIR QQTGHYFLFA TSLLKDAHPV TVTLKQASLD DALKEIFKNQ PFTYTIQDNA
ILVNPKPQNL SEKIKDFFSD IVIRGRVTDE NGAPLPGASV KANGKVAITN SEGNFELTGI
NESSTVEVSY IGYRTISMVA SVEFMAIRLS LNSSDLQEVV INKGYYQTTK ALNTGNVSMV
EAKDLARNPV SNPLIALQAQ VPGLFISQTS GVSGSKVNVR LRGQNSLRFD ANNPLYIIDG
VPFPVIVTTS GAGAAGELSP FANLALNDIE KIEVLKDADA TAIYGSRGAN GVILITTKKG
VNGGTRVSFD VGNGVGVTSN RIHLMKTDQY LAMRRLALAN DGVTTPAASD YDLNGKWGDI
NQYTDWQDLL IGGTAHFTNA QTSVSGGNAN TQFIFGGAFR RESTVFPGDY HDQKASTHLS
INHKSDNQRF RSSISFSYLN DNNLLPSADF TTNIGLSPNA PMVYNADGTL NWQNGTWVNP
IWPTTQSSTA ITDNLNGSAT VGYEIINGLT INGRFGYTDI KTSTSSINPF TNYNPAVVIQ
PTQRTNSFSA GSVKTWILEP YLNYEKSLAG GKIEAVLGGT LQQTDQNFIS QFASGFSSPS
MVTNIAAATS VQVFSYTASR YRYNALYARL GYNYQDQYLI NFTGRRDASS RFGPGKQFAN
FGAIGAAWIF SKQQFVTEKL PVLSFGKLRA SYGLTGNDQI SDYKFLSTYS ATGFSYQGTG
GISPTALTNP DYGWETVKKL EAGLDLGFFK DRILPNVSWY QNRTGNQLVA YALPGITGFT
SVQANLPAIL QNRGTEFELT TQNFQGGHFR WTTSANLSIP TNKLVSIGSS SRDG
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