| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4656 |
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| Symbol | |
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| ID | 8360829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5811140 |
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| End bp | 5811580 |
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| Gene Length | 441 bp |
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| Protein Length | 146 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644966807 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003124295 |
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| Protein GI | 256423642 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000300416 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000000000395257 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGAGCTT TGAGGTCTCT TTCTGATAGT GAACTGGCTG GCAGGCTGGC TGCGGTAGAC
ACGGCTGCGG TTGAGGAGGT GTATCTTCGT TATTGGGGTT TGTTGTACCA GCATGCCCGT
AAAATGCTCC GGGACGATGC ACAGGCTGAA GATATTGTGC AGGATATTTT TGTGTATCTG
ATGAATAATT TGGGCAGGCT TTCTATTAGT ACGTCTCTTT CTTCTTATTT GTACAGGGCG
GTGCGGAACC GTGTCATTGA TTGCCTGGAT AAGGACAGCA ACAGGCAGCG CTATGTCAAT
TCGATTAAGG CGATTTATGA GAGGGGTGAG TATGTGACGG ATGAAACTAT CCGTGAGAAT
GAGATGAAGA AGCGTATAGA GGATGCAGTA GAGGCGTTCC CGCCTAATGA AGGAGGTATT
TTTAATGAGC CGGTCGGGTG A
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| Protein sequence | MGALRSLSDS ELAGRLAAVD TAAVEEVYLR YWGLLYQHAR KMLRDDAQAE DIVQDIFVYL
MNNLGRLSIS TSLSSYLYRA VRNRVIDCLD KDSNRQRYVN SIKAIYERGE YVTDETIREN
EMKKRIEDAV EAFPPNEGGI FNEPVG
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