| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4619 |
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| Symbol | |
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| ID | 8360792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5765740 |
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| End bp | 5766621 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644966773 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003124261 |
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| Protein GI | 256423608 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.143342 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGAAA CAACAGGATT ACTGGACAAG ATCCGGCATC ACGATAAATT GTCGATCGCA
CTGAATGAGA ATTGTGCGAT ACCCCTGCCG GATGACGTAA TGCAGATATT ACTCAAACCG
CATCGCCTTT CTTTTTACTA CTTTCAATAC ATTGAAAGCG GGTCTGCCAC TTTTATCGCC
GACCTGCAGA AATTCAATGT AGGTGACGGA GAACTGGCCT TCGGTTTACC CAATCAGATT
TTTACCAAAC TGCCTTATGA CAAGCACCAG CGACAGTATG CACTTTCTTT TGATGAAGAT
ACACTAAAAC TGTTGCCAGG TACCTACCAG TTCCTTGTCA ATCCATTTAA CGTCAATTCC
ATCGCTTTTG ATCCGGCTAC ACAGCAAAGG GTCAAAAACC TGCTTTCAGG TCTTTTTCAG
CTGTTGCACG CCCCCGGAAG ACAGCGAAAG GTAGAAGTCA TACTGGCACA TTTACATACC
GTGCTGACCG AGTTTAATAC TGCTTATTTT GAGCAATACA AAGCACCGGA AATAGTAGCA
GGATCTAAAC TGTCAAAGTA TATTGCTTTT AAACTGGCAG TAGAAGAAAA CCTGACAGAG
CAGCATGATG TACAAAGCAT TGCAGAGCAA TTAGCGCTGA CGTCTAATAC CCTTTATGGT
ATCGTGAAAG AATTCGGCGG TGTTTCTCCG AAAGAATGGA TCATCAACCG CCTGATGCTG
GAAGCACAAC GCAAATTGCA ATACTCCACA TTGTCAGTGA AAGAGCTGGC TTACGAACTG
GGATTCAACG ACCCAGGTTA CTTCTCCCGT CTTTTCAAAA AGAGTACAGG CAAGAGTATC
AGCCGCTATC TGGCTGACTT GCAGGATTTG TCCCACGATT AA
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| Protein sequence | MEETTGLLDK IRHHDKLSIA LNENCAIPLP DDVMQILLKP HRLSFYYFQY IESGSATFIA
DLQKFNVGDG ELAFGLPNQI FTKLPYDKHQ RQYALSFDED TLKLLPGTYQ FLVNPFNVNS
IAFDPATQQR VKNLLSGLFQ LLHAPGRQRK VEVILAHLHT VLTEFNTAYF EQYKAPEIVA
GSKLSKYIAF KLAVEENLTE QHDVQSIAEQ LALTSNTLYG IVKEFGGVSP KEWIINRLML
EAQRKLQYST LSVKELAYEL GFNDPGYFSR LFKKSTGKSI SRYLADLQDL SHD
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