| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4617 |
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| Symbol | |
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| ID | 8360790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5761831 |
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| End bp | 5764908 |
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| Gene Length | 3078 bp |
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| Protein Length | 1025 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644966771 |
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| Product | protein of unknown function DUF1680 |
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| Protein accession | YP_003124259 |
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| Protein GI | 256423606 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3533] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0602011 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.370298 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAATTT ATGCTTATAT GAAATTGTAC AAAAGATTCG TGCATGTCAT CCTGTTTATG
GCCTTCTGGA GCCAGGGTAT TCATAGCGCT CAGGCACAAA ATGGAGACCA GATACTGGAC
GGCATCGGTG AAACGGGGAT GATAGCGCGT TATGTTTTTA ACGGAGATCT GAAAGATTGG
TCCCGGAATA CCCTGCACGG TAAATCCCAG GGAAATGAAG TGTTTTTTGT CAATGACGAC
CGTTTTGGAA AGGTATTATC CCTTTCCGGC AATAACAATG CTTTCATTAC ACTTCCCGCG
GAAACATTGT CAGACATAGA ATCGCTTAGC ATATCAGGAT GGATATACCT GCATTCCAGC
CAGACGGGGC AATGTTTTTT TGACTTTGGA AAAGATGCCG GTCAGCATCT TTTTGCAGCT
CCTACCGGAA CAAGCACACA GGAAGGCTAT CAGGTAGTAA TAGCTGCGGA CAAAAGTAAT
CAGCGCAGCG CTGTTGCGCC TGCCATCGCC ATAAATAAAT GGGTACATAT GGTCATCGTC
ATAGATATTC CTTCGAAATC CATGCTCACC TATGTTGATA GTAAACCAGT AGGCGAAACA
AAGGATATTC CTTCCGGCGT ATTGGCCTTA TTCAGTCCTG GAAAAAAGCA GCTCTATATC
GGGAAGTCAT TAGTCCCCGG CGATCCCAAT CTGAATGCCA TGATACATGA TTTCCGCATT
TACCGTGTTG CACTGAGTAA CAGACAGGTT GCCGGCATTT ATAATCACGC ACGACGGGGA
TTGAATGAAG AAGTGGTCAA TACGACAGGC AAACAGGAGG ATGATCTCCC TCACTTCCCG
CCGACAGAAG CCCGGTTATA CAATACTTAT TTAATACGTG TGGCGGATGT TAAAGTGGAG
ACCTCAGTCG GAAACTTACC ACGCTTGCCC GCTTATGTAC AGGGTACCTA TCAGCATAAT
AAGAAAGGGC CGCAGGTACG GGTGATCTGG CCTTCACCTG TCGACAACAC TGCGGTACTG
AAAACCGGGC AATACACCCT TACAGGACGT GTACCAGGCA CGAATTTTCA GCCAAAGGCA
CTTGTTACCG TAAAAAGTGT CACTCAATCC CCCGCAGCTA CTTTAAAGCT GGAGCCGTTT
AAGCTGGGAC AGGTTGCACT GAAAAATGAT GCACATGGGC ATGAGACCCA ATTCGTCGAA
AACCGTGATA AGTTCATACG GACATTAGCC ACTACCGATC CGAACTCCTT TCTCTATATG
TTCCGTCATG CTTTTGGTCG GCAGCAGCCT GAAGGCGCTA AACCTTTAGA TGTGTGGGAC
AGTCAGGATA CCAAGTTGAG AGGACATGCT ACAGGACATT ACCTGACAGC CATTGCGCAA
GCTTATGCGA GTACGGGATA TGACAAGACC TTACAGCAGA ATTTCGAACA GAAAATGGCG
TACATGGTCA ACACGCTCTA TGAGTTGTCC CTGTTATCAG GAAACCCTAA GGAAACAGGC
GGAGTCGCCG TATCCGATCC TACCGCGGTG CCTTATGGTC CCGGCAAGTC AGGATATGAC
TCAGATCTGA GTAATGAAGG TATCCGCAAT GATTACTGGA ACTGGGGTAA AGGATTCATC
AGTGCTTATC CTCCGGATCA GTTTATCATG CTGGAGAAGG GCGCTAAGTA CGGCGGACAA
AAGAACCAGA TATGGGCGCC CTACTACACC CTGCATAAGA TACTGGCTGG CCTGATGGAT
GTTTATGAAG TAAGTGGTAA TCAAAAAGCG CTTACGGTAG CTACAGGTAT GGGAGACTGG
GTATATGCCC GGTTGAGTCA TGTGCCACAG GATACACTCA TAAAGATGTG GAACACCTAT
ATCGCCGGTG AATTCGGCGG CATGAATGAG GCCATGGCCC GTCTTTACCT GATTACCGGC
AAACAGCAAT ACCTGCAGAC GGCGCAGTTG TTTGACAATA TCAGGGTCTT CTTTGGCGAT
ACTGCACATT CACATGGACT GGCTAAAAAT GTGGATATTT TCCGTGGATT ACATGCCAAT
CAGCATATCC CCCAGATCGT AGGAAGTATA GAAATGTACC GTGCTTCCAA TAATCCGGAG
TATTATAAAA TAGCCGATAA CTTCTGGTAC AAGGCAGTCA ATGATTATAT GTACAGTATC
GGAGGCGTCG CAGGTGCACG TAATCCCGCT AACGCGGAAT GTTTTATCAG TCAGCCTGCT
ACCTTGTATG AGAACGGTTT CTCTTCTGGA GGACAGAACG AAACCTGTGC CACCTACAAT
ATGCTGAAGC TAACCAGTGA CCTGTTCCTC TTCGATCAAC GGGCGGAATT CATGGACTAT
TATGAGCGGG CGTTATACAA CCACATTCTT GCTTCCGTTG CCAAAGATAA CCCTGCCAAT
ACCTATCACG TGCCACTCCG GCCTGGTGCA ATCAAACAGT TTGGCAATCC GGATATGACA
GGTTTTACCT GTTGTAACGG TACAGCTATC GAGAGCAATA CCAAGTTGCA GAATACCATC
TATTTTAAGA GCAGGGATAA TCAGGCGCTC TATGTCAATC TGTATATTCC CTCTACTTTA
CAATGGACAG AGCGGAATGT AACCATAGAA CAAACAACAG ATTTCCCGAA AGAAGACGAT
ACCCGTCTTA CGATCAAAGG CAATGGACAA TTTGATATCA ATGTACGTGT GCCTGGCTGG
GCGACAAAAG GATTTTTTGT GAAGATTAAT GGTAAAGAAC AGGCACTTAC CGCTAAGCCG
GGTACTTACC TGACCATCCG CCGGCAATGG AAAGACGGCG ATATCATAGA CCTAAAAATG
CCTTTCCGGT TCCACCTTGA TCCGGTAATG GATCAGCAGA ACATTGCGAG CCTTTTTTAC
GGACCGATCC TGCTGGCAGC ACAGGAAGGG GAAGCCAGAA AGGATTGGCG CAAAATAACC
CTGAATGCAG ACGATATCAG CAAGTCCATC AAAGGAGATC CGCAACAATT GGAATTTACA
ATTGATGATG TGGTGTTTAA ACCGTTTTAT GAAACATATG GCCGTCACTC TGTTTACCTG
GATGTACAGT TGAAATAG
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| Protein sequence | MEIYAYMKLY KRFVHVILFM AFWSQGIHSA QAQNGDQILD GIGETGMIAR YVFNGDLKDW
SRNTLHGKSQ GNEVFFVNDD RFGKVLSLSG NNNAFITLPA ETLSDIESLS ISGWIYLHSS
QTGQCFFDFG KDAGQHLFAA PTGTSTQEGY QVVIAADKSN QRSAVAPAIA INKWVHMVIV
IDIPSKSMLT YVDSKPVGET KDIPSGVLAL FSPGKKQLYI GKSLVPGDPN LNAMIHDFRI
YRVALSNRQV AGIYNHARRG LNEEVVNTTG KQEDDLPHFP PTEARLYNTY LIRVADVKVE
TSVGNLPRLP AYVQGTYQHN KKGPQVRVIW PSPVDNTAVL KTGQYTLTGR VPGTNFQPKA
LVTVKSVTQS PAATLKLEPF KLGQVALKND AHGHETQFVE NRDKFIRTLA TTDPNSFLYM
FRHAFGRQQP EGAKPLDVWD SQDTKLRGHA TGHYLTAIAQ AYASTGYDKT LQQNFEQKMA
YMVNTLYELS LLSGNPKETG GVAVSDPTAV PYGPGKSGYD SDLSNEGIRN DYWNWGKGFI
SAYPPDQFIM LEKGAKYGGQ KNQIWAPYYT LHKILAGLMD VYEVSGNQKA LTVATGMGDW
VYARLSHVPQ DTLIKMWNTY IAGEFGGMNE AMARLYLITG KQQYLQTAQL FDNIRVFFGD
TAHSHGLAKN VDIFRGLHAN QHIPQIVGSI EMYRASNNPE YYKIADNFWY KAVNDYMYSI
GGVAGARNPA NAECFISQPA TLYENGFSSG GQNETCATYN MLKLTSDLFL FDQRAEFMDY
YERALYNHIL ASVAKDNPAN TYHVPLRPGA IKQFGNPDMT GFTCCNGTAI ESNTKLQNTI
YFKSRDNQAL YVNLYIPSTL QWTERNVTIE QTTDFPKEDD TRLTIKGNGQ FDINVRVPGW
ATKGFFVKIN GKEQALTAKP GTYLTIRRQW KDGDIIDLKM PFRFHLDPVM DQQNIASLFY
GPILLAAQEG EARKDWRKIT LNADDISKSI KGDPQQLEFT IDDVVFKPFY ETYGRHSVYL
DVQLK
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