Gene Cpin_4616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4616 
Symbol 
ID8360789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5760940 
End bp5761284 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content45% 
IMG OID644966770 
Producttranscriptional regulator, HxlR family 
Protein accessionYP_003124258 
Protein GI256423605 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.95176 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.126247 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGACA ATCAGGATGT GGCATGCGAA AATGTACATT CCGCTATTCA GGATACACTG 
TATGTAGTGA ACGGGAAATG GAAACTGTTT ATCCTTTCAA TATTGGTAAA CCAGGGAAAG
AAGCGCTTCG GAGAACTCTC GCGGGAGTCT GGGATTTCTC CGAGAATACT GACAAAGGAA
CTACAGGAAC TGGAGATGAA TCAATTAATC AGCCGGACCG TCTGCAATAC CAAACCGGTC
ACTGTTGAAT ACTCGTCTAC ACCCTATGCA GAAACACTGA AAGAAGTCAT TGATGCAATG
ATCCGCTGGG GACAAAACCA CCGGAAGACA ATCACCGGAC AATAA
 
Protein sequence
MKDNQDVACE NVHSAIQDTL YVVNGKWKLF ILSILVNQGK KRFGELSRES GISPRILTKE 
LQELEMNQLI SRTVCNTKPV TVEYSSTPYA ETLKEVIDAM IRWGQNHRKT ITGQ