Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4616 |
Symbol | |
ID | 8360789 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 5760940 |
End bp | 5761284 |
Gene Length | 345 bp |
Protein Length | 114 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644966770 |
Product | transcriptional regulator, HxlR family |
Protein accession | YP_003124258 |
Protein GI | 256423605 |
COG category | [K] Transcription |
COG ID | [COG1733] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.95176 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.126247 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGACA ATCAGGATGT GGCATGCGAA AATGTACATT CCGCTATTCA GGATACACTG TATGTAGTGA ACGGGAAATG GAAACTGTTT ATCCTTTCAA TATTGGTAAA CCAGGGAAAG AAGCGCTTCG GAGAACTCTC GCGGGAGTCT GGGATTTCTC CGAGAATACT GACAAAGGAA CTACAGGAAC TGGAGATGAA TCAATTAATC AGCCGGACCG TCTGCAATAC CAAACCGGTC ACTGTTGAAT ACTCGTCTAC ACCCTATGCA GAAACACTGA AAGAAGTCAT TGATGCAATG ATCCGCTGGG GACAAAACCA CCGGAAGACA ATCACCGGAC AATAA
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Protein sequence | MKDNQDVACE NVHSAIQDTL YVVNGKWKLF ILSILVNQGK KRFGELSRES GISPRILTKE LQELEMNQLI SRTVCNTKPV TVEYSSTPYA ETLKEVIDAM IRWGQNHRKT ITGQ
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