| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4612 |
|---|
| Symbol | |
|---|
| ID | 8360785 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 5756485 |
|---|
| End bp | 5759097 |
|---|
| Gene Length | 2613 bp |
|---|
| Protein Length | 870 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 644966766 |
|---|
| Product | peptidase S9 prolyl oligopeptidase active site domain protein |
|---|
| Protein accession | YP_003124254 |
|---|
| Protein GI | 256423601 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.480483 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACTC TGATTTTTAT ACATTGCTTC CTCTATCTAG TCATTACTGC CCACGCTCAA
AAGCCACCAC TTAGGATAGA CAGCTTCAAA TCATGGCCAT CCATCGGATA TGGAAATATT
AGTAATAATG GTCGCTTCGT CTACTACAAT ATGCAAACGG CGCATGAAGG AGAAACAAAG
ACAGTGGTCA GGGCCACGCA AACTGACTGG CAAACACAAT TCGATGAATT AACAGATCCC
ACATTTAACG ACCGGAGTAA TATCCTGTTC GCAATATGTA AGGATACACT GTTAAAACTG
GATTTGACTT CCCGGAAAGT GAGTTATGTT CCTGACGTCA GCAGTTTCAG GTTACTTAAA
ACAGGTCTGG ATCAGTGGCT ACTCCAAAGA TCGGTAAAAA GTAACGCGCT TTCTATCATC
AGACTTCGGG ACAATAAAAA GATTGCCCTG GATAGTATAT CGGATTTTGT GGTTAGTCAT
AACCAGCAGT ATCTGCTGCT CCAACAACTT AACAACGACA CAGGAAGATT AGTCCTTTTG
AATTTAAAGG AGGCTGTTTA CACGACAGTA TTCAATGGAT CCGGAATAAA TAATATCATC
TTCGATAACA CAGACCAGCA ATTTGCATTC TGGACTGATA GTAGCCAGCT TACACAGCTA
TGGGTCGGCA AAACAAATAT CGCCGGAGCT ACCTGTCTTT ATACTGAAAA ACAGCGAGGT
AGTGCTAACA ATGTCCATGT GTGTGCCGGA TGTTCATTCA AATTCAGCAG TAACGGACAA
CACCTGTTCC TTACATTGCA GCAGCCAATA AAGTCAGCAG TAAATAATCC AAATCTCGTT
ATCTCCAGTT ATCAGGATCC TATTCTTAAA ACAGCTGACT TCGAAGGAAC AAATATAAAT
GACACAATCA CTCATTTACT GGCGAGCATC AACTTGAATA ATAAAGAGCT TATACAGCTT
ACACAAGCGA ATGAAGAGAT TATATTGGAA ACACCAAGGG AGGAAACCCC AGATAATTAT
ATTATCATCA GATGCCGGAC ACAAGACAGT ACCGACCAAA CGTATACTGA TGCCTATAAC
TACTACCTCT GTTCGACAGC ATCAGGGAAG CGTTTCCCCG TTAAATTAAA CAGCCAGACA
GGATTAAAAA GTATCCAGAT CTCGCCAGGG GGTAAATACC TGGTGTATTA TGATCCTGCA
TTCAGTGCTT ATTACAGCGT TTCTCTTTCA GATCTGCAGC GTGTGAAGAT ATTAAGCAGC
GAAACTGAAA GTTTACTGGA TTTCAGGCTG AAGGATTATC CGAAAGCACA ACATCCGGTT
GGCATCACCG GCTGGCTTTC TGAAGACCGG CATGTACTGA TCAGTACAAC CTGCAATATT
TATCTTGTAG ATCCGGAAGC CAGACAACAA ACTGTAAACC TGACCGCAGG TTTGCAGCAA
AACAGGCATA TCATCTATCA CTTACCACTT TCCAGGTACA GACTTCAGCC AGAAAAAGAC
GGAACTTTCT TATTATCCGC TTTAGATCTA AATAATAAAA AGATAGCCTT GCAAAGATGG
AAACCAGGAT CTGTTGTAGA TCCCCGGAAC ATGCATTTTC AATCTGTGTA CATAGGAAAT
CTAAAGCTTT TCTATCCTCA GCTTAACCGG GACATTCACA AGGCAGTTGA TCGGAACAGT
TATCTGGTGC GGATGGAAAG CGCCGGTGAA GCACCCAATC TGTATTTTAC TGAAGACTTC
GAGCATTTCA AACAGCTTTC AGACATCCAT CCACAGAAGA ACTACAACTG GCTCACATCA
GAATTGCACA AGTATCGCGA CGCCAGAGGT TATGATGTTG AAGGTGTTCT ATACAAGCCT
GAAAATTTTG ATTCAACAAA AGTATATCCG CTGATCATAA ATATTTATGA ACAGAAAAGC
ATTGAACTCA ACAAATATGA GGCGCCGGGC AACGGTTCAG GAGGAGATAT AGATCTAAGC
AGATTGGTCA GCAATGGCTA CCTTGTATTT AAAGGCAACA TTGTGACCGA ACATAAGAAA
CCTGGTGAAG GTGCACTGGC TTCTGTATTA GCCGCTGTCG ATCATTTGAA AAAGTACAAA
TGGATAGACC CTTCAAAGAT GGCGATAACA GGACATAGCT TTGGCGGATA TGAGGTAAAC
TATATCATCA CACATTCCAA TATTTTTGCG GCGGCGTTAT CCGCTGCCGG TGTAGCAAGT
ATTATCGAAT CCTATAGTAC GCCGGTTGGA ACAGCAGGTA CCATGTGGGA CGGCTATCTC
AAGGACGGTC CTCCAAAAGT CGTCAGCGCC TTAAGCGACA GTGTGAACCT GTATGTGCAA
AATTCCCCTA TATTCTTTGC AAAAAATGTC AATACGCCTT TGTTGATGAT GCACAATACC
GAGGACGGAA ATGTTTTATT TTCTCAGGGA CTATCTTTCT TCGCAGAACT AAAAAGACTT
AGAAAAAAGG TGTGGATGTT AACATATCGG GGCGACCGGC ACGTAGTGAG CGAGGAGAAC
CAGGTGGATT ATTACACACG CTTATCAGCA TTCTTCGACC ATTATCTTAA AAACAAAAAG
ATGCCATCCT GGATGGACGG CACAAATAGA TAG
|
|---|
| Protein sequence | MKTLIFIHCF LYLVITAHAQ KPPLRIDSFK SWPSIGYGNI SNNGRFVYYN MQTAHEGETK
TVVRATQTDW QTQFDELTDP TFNDRSNILF AICKDTLLKL DLTSRKVSYV PDVSSFRLLK
TGLDQWLLQR SVKSNALSII RLRDNKKIAL DSISDFVVSH NQQYLLLQQL NNDTGRLVLL
NLKEAVYTTV FNGSGINNII FDNTDQQFAF WTDSSQLTQL WVGKTNIAGA TCLYTEKQRG
SANNVHVCAG CSFKFSSNGQ HLFLTLQQPI KSAVNNPNLV ISSYQDPILK TADFEGTNIN
DTITHLLASI NLNNKELIQL TQANEEIILE TPREETPDNY IIIRCRTQDS TDQTYTDAYN
YYLCSTASGK RFPVKLNSQT GLKSIQISPG GKYLVYYDPA FSAYYSVSLS DLQRVKILSS
ETESLLDFRL KDYPKAQHPV GITGWLSEDR HVLISTTCNI YLVDPEARQQ TVNLTAGLQQ
NRHIIYHLPL SRYRLQPEKD GTFLLSALDL NNKKIALQRW KPGSVVDPRN MHFQSVYIGN
LKLFYPQLNR DIHKAVDRNS YLVRMESAGE APNLYFTEDF EHFKQLSDIH PQKNYNWLTS
ELHKYRDARG YDVEGVLYKP ENFDSTKVYP LIINIYEQKS IELNKYEAPG NGSGGDIDLS
RLVSNGYLVF KGNIVTEHKK PGEGALASVL AAVDHLKKYK WIDPSKMAIT GHSFGGYEVN
YIITHSNIFA AALSAAGVAS IIESYSTPVG TAGTMWDGYL KDGPPKVVSA LSDSVNLYVQ
NSPIFFAKNV NTPLLMMHNT EDGNVLFSQG LSFFAELKRL RKKVWMLTYR GDRHVVSEEN
QVDYYTRLSA FFDHYLKNKK MPSWMDGTNR
|
|---|
| |