Gene Cpin_4611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4611 
Symbol 
ID8360784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5755481 
End bp5756401 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content42% 
IMG OID644966765 
Producthypothetical protein 
Protein accessionYP_003124253 
Protein GI256423600 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.313343 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.415256 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGAC TATTGATCGG ATTACTACAA TTTTTCCCTT TATTCGGCTT CGCTCAGTCA 
ACGATAAATG AGATCGAATA CCAATCCTTG CAACAGGAAT ACCGGAAGGG TACCATTGGG
AAAGAGGCGT TACTATCATT AGTGCTTAAA GAGAATGAAT TGAGAAAAGA TAGTTCGGCG
CTTAGTCTGG CGAAAGCATA CAAATCCCGG TACATAGACC ACACCAATCC TAAAGAAGCA
GTCAGTCCCG GATTACGCCT CTATCTTGCT TTTTTCAATA AAATATTCAC GACGAAAGAT
CCTTTATTCG GCTATATGGA AACGAACTCA GCACAGTCTG ATAGCCTCAT TGGCGATCCT
GGCTTTTCCA GGTGGTTTAC AGGCAGGGTC ATTTTTTATG ACCTCATCCG CCCCCAGGCT
TTTATAAATG GCAAGCCCTT GCAGCAACCG GCAGATTGGA ATGCTTTAGA AAAGCAATTG
TCTGACAAAT ATGGCGCAGA CAGAATTCCG AAACTTATTT TCGAAGCAAA ATCCAGTTGG
TACAAAGATA CCGGGGACTG GACAAATTAC ATTAGCGGTC ATATGGACAG ACTGGAACGA
GAAGGCGTAG AAACAACCGG AAACGGCGCA GCCTTCTTGA ATGACTTCAT TTACGGGACC
GTATTCTATC ATTCAAGTGA CAAAAATGTG CTGAACAAGT GTGCGGACTA TATGGAGAAA
GTGGTGAACG CTGACCCTAA TCGCTATACC AGGATAGATA CCTATTCCTG TATTCTGTAT
AAACTGGGAA AAAAGGATAA AGCGATTGCG GTTGAAGAAA AAGCGGTGAC CCTGGCCAAG
GATAAAAACG ATTGGGCCAG CGTTAAAGAA TATGAAGAAA AAATTCAGAA AATGAAAAAT
GATCAGCCAA CCTGGTTATA A
 
Protein sequence
MKRLLIGLLQ FFPLFGFAQS TINEIEYQSL QQEYRKGTIG KEALLSLVLK ENELRKDSSA 
LSLAKAYKSR YIDHTNPKEA VSPGLRLYLA FFNKIFTTKD PLFGYMETNS AQSDSLIGDP
GFSRWFTGRV IFYDLIRPQA FINGKPLQQP ADWNALEKQL SDKYGADRIP KLIFEAKSSW
YKDTGDWTNY ISGHMDRLER EGVETTGNGA AFLNDFIYGT VFYHSSDKNV LNKCADYMEK
VVNADPNRYT RIDTYSCILY KLGKKDKAIA VEEKAVTLAK DKNDWASVKE YEEKIQKMKN
DQPTWL