| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4610 |
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| Symbol | |
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| ID | 8360783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5753928 |
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| End bp | 5755412 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644966764 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003124252 |
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| Protein GI | 256423599 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0690802 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.474781 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATTC AACAATATAA AAAGCGATTT CTTTACAACA ATCCGTTGCG CTGTTTTTGT
TGCATCTGTA TAGTGCTTTC TCAATACAGT TGCAGAAAAT ACCTGGAATT AGATCCTCCG
GCAACCAGCG TCAATGCCTC AAATGTCTAT AACGACAATT CAACGGCAAT CGCAGTAGTA
ACAGCTATTT ATGCCAGAAT GAGTAACACT TTTTATGATC AGGGCCCAAC CGCTATCTCC
CTTTACCCTG AACTTTCCGC TGATAACCTG AGATTGTTTA GTGTAAATGC GAACCTAAAT
TATACCAGGC ATTATCAGAA TGAACTTGAC CAGCGATACA TCAACGTGCC CTTCTGGAAC
ACGCTGTATT CAATTATATA TTCCATTAAT GCAGCTATAG AAGGGCTCAG CGGATCAGTG
AATCTGAATA CTGTGATTCG TGACAGGTTA CTGGGAGAAC TCTATTTCCT CCGTGCCTAT
CATTATTTCT ACCTGGTCAA TCTTTATGGA GACGTACCAC TTTTAACAAG CAGCATCTAC
CAGGAAAGTA TTAAAGTACC CAGGACGGCA ACCAATGAAA TCTATGCAGA AATACTGGCT
GACCTGGATA TCGCGCGGAA GCAACTCAAC AATCTTTATG TAGACGAAAC ACTGCTTAAT
GCAACCAGTG AACGGATACG CCCTAATATA GCTGCAGTAA ATGCCCTCAG TGCAAGAGTC
TATCTATATA TGAAGCGCTA CCCTGAGGCA GAAGATGCCG CTACGAAGGT CATTTCGGAA
ACTGCGATGT ATACTTCAGA CATCCCGCTC ACTGAGATAT TTAAAAAGAA CAGCAAAGAA
ACAATATGGT CGCTACAACC TGTAAAAAAT CAGTTTAATA CCGACGAGGG TGAACTATTT
GTTTTACCTG ATGGAGGCCC GAATGATGTA CATCCACTGT ACATCTCGGA TGACCTGCTC
AATAGCTTTG AACCGGGAGA TCAACGTAAG GCAGCGTGGA TCGGCCATAT AAATGCCGAC
AATAAAGATT ATCCATATCC GGCCAAATAT AAAGCCAGGT TTGGTGAGGA AACCGTCAGC
GAATACACCA TTCTGTTACG CCTGGCAGAG CAATATCTCA TTCGTGCAGA AGCACGGAAT
GAGCAAAATA ATACAGTCGG TGCGATTGCT GATTTAAATG TACTACACAC AAGATCGCGC
GCAGCTGCTT CCCCGCAAGT ACCCAACCCA TTACCCGACC TCCCGGCAGG GCTTACACAA
ACAGCGATTA GAACCCGTAT ACTGAACGAA CGACGCGTAG AACTATTCAT CGAAGGAGGT
CATCGGTGGT TTGATATTCG AAGGGCGGGA AAAATCGATG AAATAATGAC TAAAGTGTCG
GCTACGAAAA ACGGCAACTG GCAGTCTTTT AAAGCACTTT ATCCTATTCC TCTTTCAGAT
ATATTATTAA GCCCGCTACT GAAACAAAAT CCCGGGTATA ACTAA
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| Protein sequence | MSIQQYKKRF LYNNPLRCFC CICIVLSQYS CRKYLELDPP ATSVNASNVY NDNSTAIAVV
TAIYARMSNT FYDQGPTAIS LYPELSADNL RLFSVNANLN YTRHYQNELD QRYINVPFWN
TLYSIIYSIN AAIEGLSGSV NLNTVIRDRL LGELYFLRAY HYFYLVNLYG DVPLLTSSIY
QESIKVPRTA TNEIYAEILA DLDIARKQLN NLYVDETLLN ATSERIRPNI AAVNALSARV
YLYMKRYPEA EDAATKVISE TAMYTSDIPL TEIFKKNSKE TIWSLQPVKN QFNTDEGELF
VLPDGGPNDV HPLYISDDLL NSFEPGDQRK AAWIGHINAD NKDYPYPAKY KARFGEETVS
EYTILLRLAE QYLIRAEARN EQNNTVGAIA DLNVLHTRSR AAASPQVPNP LPDLPAGLTQ
TAIRTRILNE RRVELFIEGG HRWFDIRRAG KIDEIMTKVS ATKNGNWQSF KALYPIPLSD
ILLSPLLKQN PGYN
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