| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4607 |
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| Symbol | |
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| ID | 8360780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5748577 |
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| End bp | 5749137 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644966761 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003124249 |
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| Protein GI | 256423596 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.149364 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGTATTG TAGCGTCTCT TACAGATGCA GAACTTGCTG ACCGACTGCC ACACGCAGAC
AAAGCTGCCG TAAAAGAAGT CTATATACGG TACAGAGAAT TACTGCTCAA CTATGCAAAA
AAGATGTTGG GAGATGATGA TCTGGCGGAA GATACTGTAT CCGATGTATT TGCCAATTTA
CTCACTAAAC GGGAAGCCAT CAAAATCGAC ACATCCCTTC AATCCTATCT CTACAAATCA
GTCAAAAACA GCATCCTCAA TCAGTTTGAC AAAGACCAGC ACCGGCAGCA ATATATTAAT
TCGATCCGGG AATTTTATCA GAAAGGCGAG TACGCCACCG ATGAACTGGT GCTTGAGCGC
GACCTGAGAC GCCGCATAGA AGATGCCGTC GCATCCTTTC CTCCGAAGAT GAAAGAAATA
TTCGATTTAA GCAGAAAGGC CCATCTCACC CGCAGACAAA TAGCCCAAGC TACCTGCGTA
ACAGAAGGAA CCGTTAACAC CCAGATCAAC AGAGCACTAA AAATTCTCCG CTCAAAACTC
ACCCTGTTCT TCATCTGGTA G
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| Protein sequence | MGIVASLTDA ELADRLPHAD KAAVKEVYIR YRELLLNYAK KMLGDDDLAE DTVSDVFANL
LTKREAIKID TSLQSYLYKS VKNSILNQFD KDQHRQQYIN SIREFYQKGE YATDELVLER
DLRRRIEDAV ASFPPKMKEI FDLSRKAHLT RRQIAQATCV TEGTVNTQIN RALKILRSKL
TLFFIW
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